Protein–RNA interactions for Protein: Q8BVF7

Aph1a, Gamma-secretase subunit APH-1A, mousemouse

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1aQ8BVF7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Aph1aQ8BVF7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.52■□□□□ 0.08
Aph1aQ8BVF7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Aph1aQ8BVF7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Aph1aQ8BVF7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Aph1aQ8BVF7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Aph1aQ8BVF7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Aph1aQ8BVF7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Aph1aQ8BVF7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Aph1aQ8BVF7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Aph1aQ8BVF7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Aph1aQ8BVF7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.52■□□□□ 0.07
Aph1aQ8BVF7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Aph1aQ8BVF7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Aph1aQ8BVF7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Aph1aQ8BVF7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Aph1aQ8BVF7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Aph1aQ8BVF7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Aph1aQ8BVF7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Aph1aQ8BVF7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Aph1aQ8BVF7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Aph1aQ8BVF7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Aph1aQ8BVF7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Aph1aQ8BVF7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Aph1aQ8BVF7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Aph1aQ8BVF7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Aph1aQ8BVF7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Aph1aQ8BVF7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Aph1aQ8BVF7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Aph1aQ8BVF7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Aph1aQ8BVF7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Aph1aQ8BVF7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Aph1aQ8BVF7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Aph1aQ8BVF7 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Aph1aQ8BVF7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Gm715-201ENSMUST00000117865 831 ntBASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Aph1aQ8BVF7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Aph1aQ8BVF7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Aph1aQ8BVF7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Aph1aQ8BVF7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aph1aQ8BVF7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aph1aQ8BVF7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.48■□□□□ 0.07
Aph1aQ8BVF7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aph1aQ8BVF7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aph1aQ8BVF7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aph1aQ8BVF7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Aph1aQ8BVF7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Aph1aQ8BVF7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms