Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm11Q8BUV6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm11Q8BUV6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm11Q8BUV6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm11Q8BUV6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm11Q8BUV6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm11Q8BUV6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm11Q8BUV6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Lsm11Q8BUV6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Lsm11Q8BUV6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm11Q8BUV6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm11Q8BUV6 Gm6420-201ENSMUST00000193885 723 ntBASIC14.97□□□□□ -0.01
Lsm11Q8BUV6 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.97□□□□□ -0.01
Lsm11Q8BUV6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm11Q8BUV6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.97□□□□□ -0.01
Lsm11Q8BUV6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm11Q8BUV6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm11Q8BUV6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Lsm11Q8BUV6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm11Q8BUV6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm11Q8BUV6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm11Q8BUV6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Lsm11Q8BUV6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm11Q8BUV6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm11Q8BUV6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm11Q8BUV6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm11Q8BUV6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm11Q8BUV6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm11Q8BUV6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm11Q8BUV6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm11Q8BUV6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm11Q8BUV6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm11Q8BUV6 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC14.96□□□□□ -0.01
Lsm11Q8BUV6 Nespas-201ENSMUST00000143738 1083 ntBASIC14.96□□□□□ -0.01
Lsm11Q8BUV6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.96□□□□□ -0.01
Lsm11Q8BUV6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Lsm11Q8BUV6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm11Q8BUV6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.96□□□□□ -0.01
Lsm11Q8BUV6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm11Q8BUV6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Lsm11Q8BUV6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.96□□□□□ -0.02
Lsm11Q8BUV6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lsm11Q8BUV6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lsm11Q8BUV6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.95□□□□□ -0.02
Lsm11Q8BUV6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm11Q8BUV6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm11Q8BUV6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm11Q8BUV6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm11Q8BUV6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm11Q8BUV6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms