Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Usp43Q8BUM9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp43Q8BUM9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.82■□□□□ 0.44
Usp43Q8BUM9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp43Q8BUM9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp43Q8BUM9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp43Q8BUM9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.82■□□□□ 0.44
Usp43Q8BUM9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp43Q8BUM9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp43Q8BUM9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.82■□□□□ 0.44
Usp43Q8BUM9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp43Q8BUM9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Usp43Q8BUM9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
Usp43Q8BUM9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp43Q8BUM9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp43Q8BUM9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.82■□□□□ 0.44
Usp43Q8BUM9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp43Q8BUM9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp43Q8BUM9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp43Q8BUM9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp43Q8BUM9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp43Q8BUM9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp43Q8BUM9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp43Q8BUM9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp43Q8BUM9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp43Q8BUM9 Gm37292-201ENSMUST00000192062 758 ntBASIC17.81■□□□□ 0.44
Usp43Q8BUM9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp43Q8BUM9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Usp43Q8BUM9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Usp43Q8BUM9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp43Q8BUM9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp43Q8BUM9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.81■□□□□ 0.44
Usp43Q8BUM9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp43Q8BUM9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp43Q8BUM9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Gm20760-201ENSMUST00000179197 648 ntBASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Usp43Q8BUM9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.79■□□□□ 0.44
Usp43Q8BUM9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp43Q8BUM9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp43Q8BUM9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp43Q8BUM9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp43Q8BUM9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Usp43Q8BUM9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.79■□□□□ 0.44
Usp43Q8BUM9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp43Q8BUM9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Usp43Q8BUM9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp43Q8BUM9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp43Q8BUM9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Usp43Q8BUM9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp43Q8BUM9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp43Q8BUM9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
Usp43Q8BUM9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp43Q8BUM9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp43Q8BUM9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp43Q8BUM9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp43Q8BUM9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp43Q8BUM9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp43Q8BUM9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp43Q8BUM9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Usp43Q8BUM9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms