Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Cdk5rap1Q8BTW8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk5rap1Q8BTW8 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.69■□□□□ 0.26
Cdk5rap1Q8BTW8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk5rap1Q8BTW8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk5rap1Q8BTW8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk5rap1Q8BTW8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk5rap1Q8BTW8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 Gm27463-201ENSMUST00000183569 57 ntBASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 Gm7977-201ENSMUST00000193787 748 ntBASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk5rap1Q8BTW8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk5rap1Q8BTW8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk5rap1Q8BTW8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk5rap1Q8BTW8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Cdk5rap1Q8BTW8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Cdk5rap1Q8BTW8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk5rap1Q8BTW8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk5rap1Q8BTW8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk5rap1Q8BTW8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.67■□□□□ 0.26
Cdk5rap1Q8BTW8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.67■□□□□ 0.26
Cdk5rap1Q8BTW8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk5rap1Q8BTW8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk5rap1Q8BTW8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk5rap1Q8BTW8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk5rap1Q8BTW8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap1Q8BTW8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap1Q8BTW8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap1Q8BTW8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cdk5rap1Q8BTW8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap1Q8BTW8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap1Q8BTW8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap1Q8BTW8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap1Q8BTW8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap1Q8BTW8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.66■□□□□ 0.26
Cdk5rap1Q8BTW8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.66■□□□□ 0.26
Cdk5rap1Q8BTW8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap1Q8BTW8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cdk5rap1Q8BTW8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cdk5rap1Q8BTW8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap1Q8BTW8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap1Q8BTW8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap1Q8BTW8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap1Q8BTW8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap1Q8BTW8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Gm7889-201ENSMUST00000185591 958 ntBASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap1Q8BTW8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Cdk5rap1Q8BTW8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap1Q8BTW8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap1Q8BTW8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap1Q8BTW8 Fst-202ENSMUST00000223640 2612 ntBASIC16.64■□□□□ 0.25
Cdk5rap1Q8BTW8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Cdk5rap1Q8BTW8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap1Q8BTW8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.64■□□□□ 0.25
Cdk5rap1Q8BTW8 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.64■□□□□ 0.25
Cdk5rap1Q8BTW8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap1Q8BTW8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap1Q8BTW8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap1Q8BTW8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms