Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.63■□□□□ 0.41
Cpsf7Q8BTV2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf7Q8BTV2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf7Q8BTV2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf7Q8BTV2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cpsf7Q8BTV2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cpsf7Q8BTV2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf7Q8BTV2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf7Q8BTV2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf7Q8BTV2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf7Q8BTV2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf7Q8BTV2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf7Q8BTV2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf7Q8BTV2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf7Q8BTV2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cpsf7Q8BTV2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cpsf7Q8BTV2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf7Q8BTV2 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.62■□□□□ 0.41
Cpsf7Q8BTV2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf7Q8BTV2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf7Q8BTV2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Cpsf7Q8BTV2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf7Q8BTV2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf7Q8BTV2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf7Q8BTV2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf7Q8BTV2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Cpsf7Q8BTV2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf7Q8BTV2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Cpsf7Q8BTV2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cpsf7Q8BTV2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.61■□□□□ 0.41
Cpsf7Q8BTV2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf7Q8BTV2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf7Q8BTV2 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.61■□□□□ 0.41
Cpsf7Q8BTV2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf7Q8BTV2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf7Q8BTV2 Gm7291-201ENSMUST00000199147 382 ntBASIC17.61■□□□□ 0.41
Cpsf7Q8BTV2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf7Q8BTV2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf7Q8BTV2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf7Q8BTV2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf7Q8BTV2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf7Q8BTV2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf7Q8BTV2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf7Q8BTV2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf7Q8BTV2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf7Q8BTV2 Gm29257-201ENSMUST00000186115 639 ntBASIC17.6■□□□□ 0.41
Cpsf7Q8BTV2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.6■□□□□ 0.41
Cpsf7Q8BTV2 Gm10033-202ENSMUST00000211874 928 ntBASIC17.6■□□□□ 0.41
Cpsf7Q8BTV2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf7Q8BTV2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf7Q8BTV2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf7Q8BTV2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf7Q8BTV2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf7Q8BTV2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Cpsf7Q8BTV2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf7Q8BTV2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf7Q8BTV2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf7Q8BTV2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf7Q8BTV2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cpsf7Q8BTV2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Cpsf7Q8BTV2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf7Q8BTV2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf7Q8BTV2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf7Q8BTV2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf7Q8BTV2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf7Q8BTV2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.58■□□□□ 0.41
Cpsf7Q8BTV2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cpsf7Q8BTV2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cpsf7Q8BTV2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Cpsf7Q8BTV2 Gm10849-201ENSMUST00000100397 618 ntBASIC17.58■□□□□ 0.4
Cpsf7Q8BTV2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpsf7Q8BTV2 Gm27405-201ENSMUST00000184201 112 ntBASIC17.58■□□□□ 0.4
Cpsf7Q8BTV2 Mir8112-201ENSMUST00000184382 131 ntBASIC17.58■□□□□ 0.4
Cpsf7Q8BTV2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.58■□□□□ 0.4
Cpsf7Q8BTV2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cpsf7Q8BTV2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.58■□□□□ 0.4
Cpsf7Q8BTV2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpsf7Q8BTV2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpsf7Q8BTV2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpsf7Q8BTV2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.58■□□□□ 0.4
Cpsf7Q8BTV2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.57■□□□□ 0.4
Cpsf7Q8BTV2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf7Q8BTV2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf7Q8BTV2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf7Q8BTV2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf7Q8BTV2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf7Q8BTV2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf7Q8BTV2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf7Q8BTV2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cpsf7Q8BTV2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.57■□□□□ 0.4
Cpsf7Q8BTV2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.57■□□□□ 0.4
Cpsf7Q8BTV2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf7Q8BTV2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cpsf7Q8BTV2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf7Q8BTV2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf7Q8BTV2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf7Q8BTV2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpsf7Q8BTV2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.57■□□□□ 0.4
Cpsf7Q8BTV2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms