Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rd3Q8BRE0 AA414768-201ENSMUST00000121924 1257 ntBASIC18.67■□□□□ 0.58
Rd3Q8BRE0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rd3Q8BRE0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rd3Q8BRE0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.67■□□□□ 0.58
Rd3Q8BRE0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rd3Q8BRE0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rd3Q8BRE0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rd3Q8BRE0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rd3Q8BRE0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rd3Q8BRE0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rd3Q8BRE0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rd3Q8BRE0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rd3Q8BRE0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rd3Q8BRE0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rd3Q8BRE0 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.66■□□□□ 0.58
Rd3Q8BRE0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rd3Q8BRE0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rd3Q8BRE0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rd3Q8BRE0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rd3Q8BRE0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rd3Q8BRE0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rd3Q8BRE0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rd3Q8BRE0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rd3Q8BRE0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.65■□□□□ 0.58
Rd3Q8BRE0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rd3Q8BRE0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rd3Q8BRE0 Tgds-204ENSMUST00000228543 1594 ntBASIC18.65■□□□□ 0.58
Rd3Q8BRE0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rd3Q8BRE0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rd3Q8BRE0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rd3Q8BRE0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rd3Q8BRE0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rd3Q8BRE0 Gm22697-201ENSMUST00000175194 63 ntBASIC18.65■□□□□ 0.58
Rd3Q8BRE0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rd3Q8BRE0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rd3Q8BRE0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rd3Q8BRE0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.65■□□□□ 0.58
Rd3Q8BRE0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Rd3Q8BRE0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
Rd3Q8BRE0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rd3Q8BRE0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rd3Q8BRE0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Rd3Q8BRE0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Rd3Q8BRE0 Gm13401-201ENSMUST00000117074 291 ntBASIC18.64■□□□□ 0.57
Rd3Q8BRE0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.64■□□□□ 0.57
Rd3Q8BRE0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rd3Q8BRE0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.64■□□□□ 0.57
Rd3Q8BRE0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.64■□□□□ 0.57
Rd3Q8BRE0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.64■□□□□ 0.57
Rd3Q8BRE0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rd3Q8BRE0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rd3Q8BRE0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.64■□□□□ 0.57
Rd3Q8BRE0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rd3Q8BRE0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rd3Q8BRE0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rd3Q8BRE0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rd3Q8BRE0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rd3Q8BRE0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rd3Q8BRE0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rd3Q8BRE0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
Rd3Q8BRE0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Rd3Q8BRE0 Gm7638-201ENSMUST00000121348 967 ntBASIC18.63■□□□□ 0.57
Rd3Q8BRE0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rd3Q8BRE0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.63■□□□□ 0.57
Rd3Q8BRE0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rd3Q8BRE0 Gm18101-201ENSMUST00000215769 548 ntBASIC18.63■□□□□ 0.57
Rd3Q8BRE0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.63■□□□□ 0.57
Rd3Q8BRE0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rd3Q8BRE0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rd3Q8BRE0 Golph3-205ENSMUST00000228671 2842 ntBASIC18.63■□□□□ 0.57
Rd3Q8BRE0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rd3Q8BRE0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rd3Q8BRE0 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Gm10418-201ENSMUST00000100943 576 ntBASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Gm6345-202ENSMUST00000180900 204 ntBASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rd3Q8BRE0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rd3Q8BRE0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Rd3Q8BRE0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rd3Q8BRE0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rd3Q8BRE0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rd3Q8BRE0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms