Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Gm22325-201ENSMUST00000158904 308 ntBASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpsf4Q8BQZ5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4Q8BQZ5 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4Q8BQZ5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4Q8BQZ5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cpsf4Q8BQZ5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4Q8BQZ5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4Q8BQZ5 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.05■□□□□ 0.32
Cpsf4Q8BQZ5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4Q8BQZ5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
Cpsf4Q8BQZ5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4Q8BQZ5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4Q8BQZ5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4Q8BQZ5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4Q8BQZ5 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4Q8BQZ5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cpsf4Q8BQZ5 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4Q8BQZ5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4Q8BQZ5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4Q8BQZ5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4Q8BQZ5 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cpsf4Q8BQZ5 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpsf4Q8BQZ5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpsf4Q8BQZ5 Gm2399-201ENSMUST00000104944 225 ntBASIC17.04■□□□□ 0.32
Cpsf4Q8BQZ5 Gm11249-201ENSMUST00000117071 859 ntBASIC17.04■□□□□ 0.32
Cpsf4Q8BQZ5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpsf4Q8BQZ5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cpsf4Q8BQZ5 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpsf4Q8BQZ5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.04■□□□□ 0.32
Cpsf4Q8BQZ5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.03■□□□□ 0.32
Cpsf4Q8BQZ5 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cpsf4Q8BQZ5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpsf4Q8BQZ5 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.03■□□□□ 0.32
Cpsf4Q8BQZ5 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cpsf4Q8BQZ5 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.03■□□□□ 0.32
Cpsf4Q8BQZ5 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cpsf4Q8BQZ5 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cpsf4Q8BQZ5 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cpsf4Q8BQZ5 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.03■□□□□ 0.32
Cpsf4Q8BQZ5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.03■□□□□ 0.32
Cpsf4Q8BQZ5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cpsf4Q8BQZ5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.03■□□□□ 0.32
Cpsf4Q8BQZ5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cpsf4Q8BQZ5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpsf4Q8BQZ5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpsf4Q8BQZ5 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpsf4Q8BQZ5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpsf4Q8BQZ5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.03■□□□□ 0.32
Cpsf4Q8BQZ5 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.03■□□□□ 0.32
Cpsf4Q8BQZ5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpsf4Q8BQZ5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpsf4Q8BQZ5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cpsf4Q8BQZ5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpsf4Q8BQZ5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpsf4Q8BQZ5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpsf4Q8BQZ5 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpsf4Q8BQZ5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Cpsf4Q8BQZ5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cpsf4Q8BQZ5 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cpsf4Q8BQZ5 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Cpsf4Q8BQZ5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cpsf4Q8BQZ5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cpsf4Q8BQZ5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cpsf4Q8BQZ5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Cpsf4Q8BQZ5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cpsf4Q8BQZ5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.01■□□□□ 0.31
Cpsf4Q8BQZ5 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpsf4Q8BQZ5 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpsf4Q8BQZ5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.01■□□□□ 0.31
Cpsf4Q8BQZ5 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpsf4Q8BQZ5 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpsf4Q8BQZ5 Gm13168-201ENSMUST00000121771 632 ntBASIC17.01■□□□□ 0.31
Cpsf4Q8BQZ5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms