Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nop53Q8BK35 Gm27011-201ENSMUST00000182352 972 ntBASIC18.84■□□□□ 0.61
Nop53Q8BK35 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.84■□□□□ 0.61
Nop53Q8BK35 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nop53Q8BK35 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nop53Q8BK35 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nop53Q8BK35 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.84■□□□□ 0.61
Nop53Q8BK35 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
Nop53Q8BK35 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nop53Q8BK35 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nop53Q8BK35 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nop53Q8BK35 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Nop53Q8BK35 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nop53Q8BK35 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nop53Q8BK35 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nop53Q8BK35 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nop53Q8BK35 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nop53Q8BK35 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nop53Q8BK35 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nop53Q8BK35 Gm7290-201ENSMUST00000104990 617 ntBASIC18.83■□□□□ 0.6
Nop53Q8BK35 Gm12918-201ENSMUST00000120234 636 ntBASIC18.83■□□□□ 0.6
Nop53Q8BK35 Gm15710-201ENSMUST00000121821 636 ntBASIC18.83■□□□□ 0.6
Nop53Q8BK35 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.83■□□□□ 0.6
Nop53Q8BK35 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.83■□□□□ 0.6
Nop53Q8BK35 Gm5075-201ENSMUST00000196916 622 ntBASIC18.83■□□□□ 0.6
Nop53Q8BK35 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.83■□□□□ 0.6
Nop53Q8BK35 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.83■□□□□ 0.6
Nop53Q8BK35 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nop53Q8BK35 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.83■□□□□ 0.6
Nop53Q8BK35 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nop53Q8BK35 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nop53Q8BK35 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.82■□□□□ 0.6
Nop53Q8BK35 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Gm6365-201ENSMUST00000054711 744 ntBASIC18.82■□□□□ 0.6
Nop53Q8BK35 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop53Q8BK35 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nop53Q8BK35 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.81■□□□□ 0.6
Nop53Q8BK35 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.81■□□□□ 0.6
Nop53Q8BK35 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.81■□□□□ 0.6
Nop53Q8BK35 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nop53Q8BK35 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nop53Q8BK35 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nop53Q8BK35 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nop53Q8BK35 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nop53Q8BK35 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nop53Q8BK35 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nop53Q8BK35 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Nop53Q8BK35 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nop53Q8BK35 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nop53Q8BK35 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nop53Q8BK35 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nop53Q8BK35 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nop53Q8BK35 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nop53Q8BK35 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nop53Q8BK35 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.81■□□□□ 0.6
Nop53Q8BK35 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nop53Q8BK35 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nop53Q8BK35 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Nop53Q8BK35 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nop53Q8BK35 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nop53Q8BK35 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nop53Q8BK35 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nop53Q8BK35 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nop53Q8BK35 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.8■□□□□ 0.6
Nop53Q8BK35 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nop53Q8BK35 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nop53Q8BK35 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.8■□□□□ 0.6
Nop53Q8BK35 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nop53Q8BK35 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nop53Q8BK35 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nop53Q8BK35 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nop53Q8BK35 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nop53Q8BK35 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nop53Q8BK35 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nop53Q8BK35 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nop53Q8BK35 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nop53Q8BK35 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nop53Q8BK35 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nop53Q8BK35 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nop53Q8BK35 Idnk-204ENSMUST00000226010 1898 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms