Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Smarcal1Q8BJL0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcal1Q8BJL0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Smarcal1Q8BJL0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcal1Q8BJL0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcal1Q8BJL0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcal1Q8BJL0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcal1Q8BJL0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcal1Q8BJL0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Smarcal1Q8BJL0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcal1Q8BJL0 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.71■□□□□ 0.59
Smarcal1Q8BJL0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.71■□□□□ 0.59
Smarcal1Q8BJL0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcal1Q8BJL0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcal1Q8BJL0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcal1Q8BJL0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.7■□□□□ 0.58
Smarcal1Q8BJL0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcal1Q8BJL0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.7■□□□□ 0.58
Smarcal1Q8BJL0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcal1Q8BJL0 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.7■□□□□ 0.58
Smarcal1Q8BJL0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcal1Q8BJL0 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.7■□□□□ 0.58
Smarcal1Q8BJL0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Smarcal1Q8BJL0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.7■□□□□ 0.58
Smarcal1Q8BJL0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcal1Q8BJL0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcal1Q8BJL0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smarcal1Q8BJL0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Smarcal1Q8BJL0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcal1Q8BJL0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 Gm17661-201ENSMUST00000170317 270 ntBASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcal1Q8BJL0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.68■□□□□ 0.58
Smarcal1Q8BJL0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcal1Q8BJL0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcal1Q8BJL0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcal1Q8BJL0 Ank2-226ENSMUST00000189368 339 ntBASIC18.68■□□□□ 0.58
Smarcal1Q8BJL0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcal1Q8BJL0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.68■□□□□ 0.58
Smarcal1Q8BJL0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcal1Q8BJL0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcal1Q8BJL0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcal1Q8BJL0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcal1Q8BJL0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.68■□□□□ 0.58
Smarcal1Q8BJL0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcal1Q8BJL0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcal1Q8BJL0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcal1Q8BJL0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcal1Q8BJL0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcal1Q8BJL0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcal1Q8BJL0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcal1Q8BJL0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.67■□□□□ 0.58
Smarcal1Q8BJL0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcal1Q8BJL0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.67■□□□□ 0.58
Smarcal1Q8BJL0 Gm9103-201ENSMUST00000119371 405 ntBASIC18.67■□□□□ 0.58
Smarcal1Q8BJL0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcal1Q8BJL0 Gm27741-201ENSMUST00000185060 237 ntBASIC18.67■□□□□ 0.58
Smarcal1Q8BJL0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.67■□□□□ 0.58
Smarcal1Q8BJL0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcal1Q8BJL0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Smarcal1Q8BJL0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcal1Q8BJL0 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.67■□□□□ 0.58
Smarcal1Q8BJL0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcal1Q8BJL0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcal1Q8BJL0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Smarcal1Q8BJL0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcal1Q8BJL0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcal1Q8BJL0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcal1Q8BJL0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcal1Q8BJL0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcal1Q8BJL0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcal1Q8BJL0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcal1Q8BJL0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcal1Q8BJL0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcal1Q8BJL0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcal1Q8BJL0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcal1Q8BJL0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcal1Q8BJL0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcal1Q8BJL0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcal1Q8BJL0 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.66■□□□□ 0.58
Smarcal1Q8BJL0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms