Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh20Q8BIZ0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh20Q8BIZ0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh20Q8BIZ0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh20Q8BIZ0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh20Q8BIZ0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdh20Q8BIZ0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdh20Q8BIZ0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh20Q8BIZ0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Pcdh20Q8BIZ0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh20Q8BIZ0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh20Q8BIZ0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.18■□□□□ 0.34
Pcdh20Q8BIZ0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh20Q8BIZ0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdh20Q8BIZ0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh20Q8BIZ0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdh20Q8BIZ0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.17■□□□□ 0.34
Pcdh20Q8BIZ0 Gm20760-201ENSMUST00000179197 648 ntBASIC17.17■□□□□ 0.34
Pcdh20Q8BIZ0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdh20Q8BIZ0 Gm20049-201ENSMUST00000219950 730 ntBASIC17.17■□□□□ 0.34
Pcdh20Q8BIZ0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdh20Q8BIZ0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh20Q8BIZ0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdh20Q8BIZ0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh20Q8BIZ0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdh20Q8BIZ0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh20Q8BIZ0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh20Q8BIZ0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Gm12527-201ENSMUST00000117967 564 ntBASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh20Q8BIZ0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh20Q8BIZ0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh20Q8BIZ0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh20Q8BIZ0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh20Q8BIZ0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh20Q8BIZ0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh20Q8BIZ0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdh20Q8BIZ0 Gm10653-202ENSMUST00000139570 835 ntBASIC17.14■□□□□ 0.33
Pcdh20Q8BIZ0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh20Q8BIZ0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh20Q8BIZ0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh20Q8BIZ0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh20Q8BIZ0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh20Q8BIZ0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdh20Q8BIZ0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh20Q8BIZ0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh20Q8BIZ0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh20Q8BIZ0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh20Q8BIZ0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdh20Q8BIZ0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh20Q8BIZ0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Pcdh20Q8BIZ0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Pcdh20Q8BIZ0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Pcdh20Q8BIZ0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh20Q8BIZ0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Pcdh20Q8BIZ0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh20Q8BIZ0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh20Q8BIZ0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms