Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SpidrQ8BGX7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SpidrQ8BGX7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.54■□□□□ 0.88
SpidrQ8BGX7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SpidrQ8BGX7 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SpidrQ8BGX7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SpidrQ8BGX7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SpidrQ8BGX7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SpidrQ8BGX7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SpidrQ8BGX7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SpidrQ8BGX7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpidrQ8BGX7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SpidrQ8BGX7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SpidrQ8BGX7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpidrQ8BGX7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpidrQ8BGX7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SpidrQ8BGX7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpidrQ8BGX7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpidrQ8BGX7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpidrQ8BGX7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpidrQ8BGX7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpidrQ8BGX7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpidrQ8BGX7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpidrQ8BGX7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpidrQ8BGX7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpidrQ8BGX7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpidrQ8BGX7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SpidrQ8BGX7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SpidrQ8BGX7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SpidrQ8BGX7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SpidrQ8BGX7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SpidrQ8BGX7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
SpidrQ8BGX7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SpidrQ8BGX7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
SpidrQ8BGX7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.52■□□□□ 0.87
SpidrQ8BGX7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.87
SpidrQ8BGX7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SpidrQ8BGX7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SpidrQ8BGX7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SpidrQ8BGX7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.51■□□□□ 0.87
SpidrQ8BGX7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SpidrQ8BGX7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SpidrQ8BGX7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SpidrQ8BGX7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SpidrQ8BGX7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SpidrQ8BGX7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.51■□□□□ 0.87
SpidrQ8BGX7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SpidrQ8BGX7 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.51■□□□□ 0.87
SpidrQ8BGX7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SpidrQ8BGX7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
SpidrQ8BGX7 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.51■□□□□ 0.87
SpidrQ8BGX7 Idnk-204ENSMUST00000226010 1898 ntBASIC20.51■□□□□ 0.87
SpidrQ8BGX7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SpidrQ8BGX7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SpidrQ8BGX7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SpidrQ8BGX7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SpidrQ8BGX7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SpidrQ8BGX7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SpidrQ8BGX7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SpidrQ8BGX7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.5■□□□□ 0.87
SpidrQ8BGX7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.5■□□□□ 0.87
SpidrQ8BGX7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SpidrQ8BGX7 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.5■□□□□ 0.87
SpidrQ8BGX7 Gm10566-201ENSMUST00000086739 996 ntBASIC20.5■□□□□ 0.87
SpidrQ8BGX7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SpidrQ8BGX7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SpidrQ8BGX7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SpidrQ8BGX7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SpidrQ8BGX7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SpidrQ8BGX7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
SpidrQ8BGX7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SpidrQ8BGX7 Gm17808-201ENSMUST00000200859 894 ntBASIC20.49■□□□□ 0.87
SpidrQ8BGX7 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SpidrQ8BGX7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SpidrQ8BGX7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SpidrQ8BGX7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SpidrQ8BGX7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SpidrQ8BGX7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SpidrQ8BGX7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SpidrQ8BGX7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SpidrQ8BGX7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SpidrQ8BGX7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.48■□□□□ 0.87
SpidrQ8BGX7 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.48■□□□□ 0.87
SpidrQ8BGX7 Gm11355-201ENSMUST00000121120 306 ntBASIC20.48■□□□□ 0.87
SpidrQ8BGX7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.48■□□□□ 0.87
SpidrQ8BGX7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.48■□□□□ 0.87
SpidrQ8BGX7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.48■□□□□ 0.87
SpidrQ8BGX7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SpidrQ8BGX7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SpidrQ8BGX7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
SpidrQ8BGX7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SpidrQ8BGX7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.48■□□□□ 0.87
SpidrQ8BGX7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SpidrQ8BGX7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SpidrQ8BGX7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SpidrQ8BGX7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SpidrQ8BGX7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SpidrQ8BGX7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.47■□□□□ 0.87
SpidrQ8BGX7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SpidrQ8BGX7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms