Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
U2af1l4Q8BGJ9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
U2af1l4Q8BGJ9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
U2af1l4Q8BGJ9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
U2af1l4Q8BGJ9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
U2af1l4Q8BGJ9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
U2af1l4Q8BGJ9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
U2af1l4Q8BGJ9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
U2af1l4Q8BGJ9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
U2af1l4Q8BGJ9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
U2af1l4Q8BGJ9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
U2af1l4Q8BGJ9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.73■□□□□ 0.91
U2af1l4Q8BGJ9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.72■□□□□ 0.91
U2af1l4Q8BGJ9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
U2af1l4Q8BGJ9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
U2af1l4Q8BGJ9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
U2af1l4Q8BGJ9 Gm38285-201ENSMUST00000192928 922 ntBASIC20.72■□□□□ 0.91
U2af1l4Q8BGJ9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.72■□□□□ 0.91
U2af1l4Q8BGJ9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
U2af1l4Q8BGJ9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
U2af1l4Q8BGJ9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
U2af1l4Q8BGJ9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
U2af1l4Q8BGJ9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1l4Q8BGJ9 Gm27741-201ENSMUST00000185060 237 ntBASIC20.71■□□□□ 0.91
U2af1l4Q8BGJ9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.71■□□□□ 0.91
U2af1l4Q8BGJ9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.71■□□□□ 0.91
U2af1l4Q8BGJ9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.71■□□□□ 0.91
U2af1l4Q8BGJ9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1l4Q8BGJ9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1l4Q8BGJ9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1l4Q8BGJ9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1l4Q8BGJ9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1l4Q8BGJ9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
U2af1l4Q8BGJ9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
U2af1l4Q8BGJ9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2af1l4Q8BGJ9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
U2af1l4Q8BGJ9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2af1l4Q8BGJ9 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.7■□□□□ 0.9
U2af1l4Q8BGJ9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2af1l4Q8BGJ9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.7■□□□□ 0.9
U2af1l4Q8BGJ9 Zfp783-201ENSMUST00000095946 670 ntBASIC20.7■□□□□ 0.9
U2af1l4Q8BGJ9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2af1l4Q8BGJ9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2af1l4Q8BGJ9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2af1l4Q8BGJ9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1l4Q8BGJ9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1l4Q8BGJ9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1l4Q8BGJ9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1l4Q8BGJ9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
U2af1l4Q8BGJ9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.69■□□□□ 0.9
U2af1l4Q8BGJ9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1l4Q8BGJ9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1l4Q8BGJ9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.69■□□□□ 0.9
U2af1l4Q8BGJ9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1l4Q8BGJ9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.69■□□□□ 0.9
U2af1l4Q8BGJ9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
U2af1l4Q8BGJ9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1l4Q8BGJ9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1l4Q8BGJ9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1l4Q8BGJ9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1l4Q8BGJ9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1l4Q8BGJ9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1l4Q8BGJ9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1l4Q8BGJ9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1l4Q8BGJ9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1l4Q8BGJ9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1l4Q8BGJ9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1l4Q8BGJ9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1l4Q8BGJ9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1l4Q8BGJ9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
U2af1l4Q8BGJ9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1l4Q8BGJ9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1l4Q8BGJ9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1l4Q8BGJ9 Flg-201ENSMUST00000050758 1488 ntBASIC20.68■□□□□ 0.9
U2af1l4Q8BGJ9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1l4Q8BGJ9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.68■□□□□ 0.9
U2af1l4Q8BGJ9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
U2af1l4Q8BGJ9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2af1l4Q8BGJ9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2af1l4Q8BGJ9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
U2af1l4Q8BGJ9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2af1l4Q8BGJ9 Gm30025-201ENSMUST00000218555 728 ntBASIC20.67■□□□□ 0.9
U2af1l4Q8BGJ9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2af1l4Q8BGJ9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2af1l4Q8BGJ9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2af1l4Q8BGJ9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2af1l4Q8BGJ9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
U2af1l4Q8BGJ9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
U2af1l4Q8BGJ9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
U2af1l4Q8BGJ9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2af1l4Q8BGJ9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
U2af1l4Q8BGJ9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
U2af1l4Q8BGJ9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
U2af1l4Q8BGJ9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
U2af1l4Q8BGJ9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
U2af1l4Q8BGJ9 Gm6659-201ENSMUST00000174752 547 ntBASIC20.66■□□□□ 0.9
U2af1l4Q8BGJ9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
U2af1l4Q8BGJ9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
U2af1l4Q8BGJ9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
U2af1l4Q8BGJ9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms