Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Samm50Q8BGH2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Samm50Q8BGH2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Samm50Q8BGH2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Samm50Q8BGH2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Samm50Q8BGH2 Gm12896-201ENSMUST00000118430 226 ntBASIC20.62■□□□□ 0.89
Samm50Q8BGH2 Gm2559-201ENSMUST00000201323 363 ntBASIC20.62■□□□□ 0.89
Samm50Q8BGH2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Samm50Q8BGH2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Samm50Q8BGH2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Samm50Q8BGH2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Samm50Q8BGH2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Samm50Q8BGH2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Samm50Q8BGH2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Samm50Q8BGH2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Samm50Q8BGH2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Samm50Q8BGH2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Samm50Q8BGH2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Samm50Q8BGH2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Samm50Q8BGH2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Samm50Q8BGH2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Samm50Q8BGH2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Samm50Q8BGH2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.61■□□□□ 0.89
Samm50Q8BGH2 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.61■□□□□ 0.89
Samm50Q8BGH2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Samm50Q8BGH2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Samm50Q8BGH2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Samm50Q8BGH2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Samm50Q8BGH2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Samm50Q8BGH2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Samm50Q8BGH2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Samm50Q8BGH2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.6■□□□□ 0.89
Samm50Q8BGH2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.6■□□□□ 0.89
Samm50Q8BGH2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Samm50Q8BGH2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Samm50Q8BGH2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Samm50Q8BGH2 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.6■□□□□ 0.89
Samm50Q8BGH2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Samm50Q8BGH2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Samm50Q8BGH2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Samm50Q8BGH2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Samm50Q8BGH2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Samm50Q8BGH2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Samm50Q8BGH2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Samm50Q8BGH2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Samm50Q8BGH2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Samm50Q8BGH2 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.59■□□□□ 0.89
Samm50Q8BGH2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Samm50Q8BGH2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Samm50Q8BGH2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Samm50Q8BGH2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Samm50Q8BGH2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Samm50Q8BGH2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Samm50Q8BGH2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.59■□□□□ 0.89
Samm50Q8BGH2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Samm50Q8BGH2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Samm50Q8BGH2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.59■□□□□ 0.89
Samm50Q8BGH2 Gm37856-201ENSMUST00000191634 999 ntBASIC20.59■□□□□ 0.89
Samm50Q8BGH2 Trmt13-210ENSMUST00000198454 880 ntBASIC20.59■□□□□ 0.89
Samm50Q8BGH2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Samm50Q8BGH2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.59■□□□□ 0.89
Samm50Q8BGH2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.58■□□□□ 0.89
Samm50Q8BGH2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Samm50Q8BGH2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Samm50Q8BGH2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Samm50Q8BGH2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Samm50Q8BGH2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Samm50Q8BGH2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Samm50Q8BGH2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Samm50Q8BGH2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Samm50Q8BGH2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Samm50Q8BGH2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Samm50Q8BGH2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Samm50Q8BGH2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Samm50Q8BGH2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Samm50Q8BGH2 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.57■□□□□ 0.88
Samm50Q8BGH2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Samm50Q8BGH2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.57■□□□□ 0.88
Samm50Q8BGH2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.57■□□□□ 0.88
Samm50Q8BGH2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Samm50Q8BGH2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Samm50Q8BGH2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Samm50Q8BGH2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Samm50Q8BGH2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.57■□□□□ 0.88
Samm50Q8BGH2 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.57■□□□□ 0.88
Samm50Q8BGH2 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.57■□□□□ 0.88
Samm50Q8BGH2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Samm50Q8BGH2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Samm50Q8BGH2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Samm50Q8BGH2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Samm50Q8BGH2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
Samm50Q8BGH2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Samm50Q8BGH2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Samm50Q8BGH2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Samm50Q8BGH2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Samm50Q8BGH2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Samm50Q8BGH2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.56■□□□□ 0.88
Samm50Q8BGH2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Samm50Q8BGH2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Samm50Q8BGH2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms