Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3hc1Q80YV2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3hc1Q80YV2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3hc1Q80YV2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Zc3hc1Q80YV2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3hc1Q80YV2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3hc1Q80YV2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Zc3hc1Q80YV2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3hc1Q80YV2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3hc1Q80YV2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3hc1Q80YV2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3hc1Q80YV2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Zc3hc1Q80YV2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 Nespas-201ENSMUST00000143738 1083 ntBASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 Gm6420-201ENSMUST00000193885 723 ntBASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zc3hc1Q80YV2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zc3hc1Q80YV2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Zc3hc1Q80YV2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Zc3hc1Q80YV2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Zc3hc1Q80YV2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Zc3hc1Q80YV2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Zc3hc1Q80YV2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3hc1Q80YV2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3hc1Q80YV2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Zc3hc1Q80YV2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3hc1Q80YV2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Zc3hc1Q80YV2 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.08■□□□□ 0.16
Zc3hc1Q80YV2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3hc1Q80YV2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3hc1Q80YV2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3hc1Q80YV2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.08■□□□□ 0.16
Zc3hc1Q80YV2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3hc1Q80YV2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3hc1Q80YV2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zc3hc1Q80YV2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Zc3hc1Q80YV2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zc3hc1Q80YV2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zc3hc1Q80YV2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zc3hc1Q80YV2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zc3hc1Q80YV2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zc3hc1Q80YV2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.06■□□□□ 0.16
Zc3hc1Q80YV2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms