Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.91□□□□□ -0.02
Upk3bQ80YF6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bQ80YF6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bQ80YF6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bQ80YF6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.91□□□□□ -0.02
Upk3bQ80YF6 Gm6420-201ENSMUST00000193885 723 ntBASIC14.91□□□□□ -0.02
Upk3bQ80YF6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Upk3bQ80YF6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bQ80YF6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bQ80YF6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bQ80YF6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bQ80YF6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bQ80YF6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bQ80YF6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.91□□□□□ -0.02
Upk3bQ80YF6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bQ80YF6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Nespas-201ENSMUST00000143738 1083 ntBASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Gm42778-201ENSMUST00000199644 553 ntBASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Upk3bQ80YF6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bQ80YF6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.89□□□□□ -0.03
Upk3bQ80YF6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Upk3bQ80YF6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk3bQ80YF6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Upk3bQ80YF6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk3bQ80YF6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk3bQ80YF6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Upk3bQ80YF6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.88□□□□□ -0.03
Upk3bQ80YF6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk3bQ80YF6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Upk3bQ80YF6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk3bQ80YF6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk3bQ80YF6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk3bQ80YF6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms