Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp8Q80U87 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Usp8Q80U87 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp8Q80U87 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp8Q80U87 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Usp8Q80U87 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp8Q80U87 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Usp8Q80U87 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp8Q80U87 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Usp8Q80U87 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp8Q80U87 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp8Q80U87 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp8Q80U87 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Usp8Q80U87 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp8Q80U87 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp8Q80U87 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp8Q80U87 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp8Q80U87 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Usp8Q80U87 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp8Q80U87 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp8Q80U87 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp8Q80U87 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp8Q80U87 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp8Q80U87 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp8Q80U87 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Usp8Q80U87 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp8Q80U87 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp8Q80U87 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp8Q80U87 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp8Q80U87 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp8Q80U87 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp8Q80U87 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp8Q80U87 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp8Q80U87 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp8Q80U87 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp8Q80U87 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Usp8Q80U87 Gm15039-201ENSMUST00000118914 875 ntBASIC17.61■□□□□ 0.41
Usp8Q80U87 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp8Q80U87 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.61■□□□□ 0.41
Usp8Q80U87 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.61■□□□□ 0.41
Usp8Q80U87 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.61■□□□□ 0.41
Usp8Q80U87 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Usp8Q80U87 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp8Q80U87 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp8Q80U87 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Usp8Q80U87 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp8Q80U87 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp8Q80U87 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.61■□□□□ 0.41
Usp8Q80U87 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp8Q80U87 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp8Q80U87 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.61■□□□□ 0.41
Usp8Q80U87 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp8Q80U87 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp8Q80U87 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp8Q80U87 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.6■□□□□ 0.41
Usp8Q80U87 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.6■□□□□ 0.41
Usp8Q80U87 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp8Q80U87 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp8Q80U87 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp8Q80U87 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp8Q80U87 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Usp8Q80U87 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp8Q80U87 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp8Q80U87 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp8Q80U87 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp8Q80U87 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp8Q80U87 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp8Q80U87 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp8Q80U87 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp8Q80U87 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.59■□□□□ 0.41
Usp8Q80U87 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp8Q80U87 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Usp8Q80U87 Gm27405-201ENSMUST00000184201 112 ntBASIC17.59■□□□□ 0.41
Usp8Q80U87 Gm7291-201ENSMUST00000199147 382 ntBASIC17.59■□□□□ 0.41
Usp8Q80U87 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.59■□□□□ 0.41
Usp8Q80U87 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp8Q80U87 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp8Q80U87 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
Usp8Q80U87 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp8Q80U87 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp8Q80U87 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp8Q80U87 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp8Q80U87 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp8Q80U87 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp8Q80U87 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Usp8Q80U87 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp8Q80U87 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.58■□□□□ 0.4
Usp8Q80U87 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Usp8Q80U87 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp8Q80U87 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Usp8Q80U87 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Usp8Q80U87 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp8Q80U87 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp8Q80U87 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Usp8Q80U87 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp8Q80U87 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp8Q80U87 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp8Q80U87 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Usp8Q80U87 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp8Q80U87 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms