Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.96
Rpap1Q80TE0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC27.33■■□□□ 1.96
Rpap1Q80TE0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC27.33■■□□□ 1.96
Rpap1Q80TE0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rpap1Q80TE0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rpap1Q80TE0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC27.32■■□□□ 1.96
Rpap1Q80TE0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rpap1Q80TE0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rpap1Q80TE0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rpap1Q80TE0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Rpap1Q80TE0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC27.32■■□□□ 1.96
Rpap1Q80TE0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Rpap1Q80TE0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rpap1Q80TE0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rpap1Q80TE0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rpap1Q80TE0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Rpap1Q80TE0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Rpap1Q80TE0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
Rpap1Q80TE0 Olfr129-201ENSMUST00000122318 993 ntBASIC27.31■■□□□ 1.96
Rpap1Q80TE0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Rpap1Q80TE0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Rpap1Q80TE0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Rpap1Q80TE0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rpap1Q80TE0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rpap1Q80TE0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rpap1Q80TE0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
Rpap1Q80TE0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC27.3■■□□□ 1.96
Rpap1Q80TE0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC27.3■■□□□ 1.96
Rpap1Q80TE0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC27.3■■□□□ 1.96
Rpap1Q80TE0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rpap1Q80TE0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC27.3■■□□□ 1.96
Rpap1Q80TE0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Rpap1Q80TE0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rpap1Q80TE0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC27.29■■□□□ 1.96
Rpap1Q80TE0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Rpap1Q80TE0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
Rpap1Q80TE0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Rpap1Q80TE0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
Rpap1Q80TE0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
Rpap1Q80TE0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC27.29■■□□□ 1.96
Rpap1Q80TE0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Rpap1Q80TE0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
Rpap1Q80TE0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
Rpap1Q80TE0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
Rpap1Q80TE0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Rpap1Q80TE0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Rpap1Q80TE0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Rpap1Q80TE0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC27.28■■□□□ 1.96
Rpap1Q80TE0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Rpap1Q80TE0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Rpap1Q80TE0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC27.28■■□□□ 1.96
Rpap1Q80TE0 AC164629.2-201ENSMUST00000217916 270 ntBASIC27.28■■□□□ 1.96
Rpap1Q80TE0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Rpap1Q80TE0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Rpap1Q80TE0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Rpap1Q80TE0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Rpap1Q80TE0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Rpap1Q80TE0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
Rpap1Q80TE0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Rpap1Q80TE0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Rpap1Q80TE0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC27.27■■□□□ 1.96
Rpap1Q80TE0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.96
Rpap1Q80TE0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rpap1Q80TE0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC27.26■■□□□ 1.95
Rpap1Q80TE0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC27.26■■□□□ 1.95
Rpap1Q80TE0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rpap1Q80TE0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Rpap1Q80TE0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rpap1Q80TE0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rpap1Q80TE0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rpap1Q80TE0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rpap1Q80TE0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Rpap1Q80TE0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rpap1Q80TE0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Rpap1Q80TE0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Rpap1Q80TE0 Gm43272-201ENSMUST00000200599 1584 ntBASIC27.26■■□□□ 1.95
Rpap1Q80TE0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rpap1Q80TE0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rpap1Q80TE0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC27.25■■□□□ 1.95
Rpap1Q80TE0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC27.25■■□□□ 1.95
Rpap1Q80TE0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC27.25■■□□□ 1.95
Rpap1Q80TE0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Rpap1Q80TE0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC27.25■■□□□ 1.95
Rpap1Q80TE0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Rpap1Q80TE0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Rpap1Q80TE0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Rpap1Q80TE0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rpap1Q80TE0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rpap1Q80TE0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rpap1Q80TE0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Rpap1Q80TE0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Rpap1Q80TE0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC27.24■■□□□ 1.95
Rpap1Q80TE0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Rpap1Q80TE0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC27.24■■□□□ 1.95
Rpap1Q80TE0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC27.24■■□□□ 1.95
Rpap1Q80TE0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Rpap1Q80TE0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC27.23■■□□□ 1.95
Rpap1Q80TE0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC27.23■■□□□ 1.95
Rpap1Q80TE0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC27.23■■□□□ 1.95
Rpap1Q80TE0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms