Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.22■□□□□ 0.67
Ush1gQ80T11 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.22■□□□□ 0.67
Ush1gQ80T11 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.22■□□□□ 0.67
Ush1gQ80T11 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ush1gQ80T11 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ush1gQ80T11 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.22■□□□□ 0.67
Ush1gQ80T11 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ush1gQ80T11 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.21■□□□□ 0.67
Ush1gQ80T11 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
Ush1gQ80T11 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ush1gQ80T11 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ush1gQ80T11 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ush1gQ80T11 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ush1gQ80T11 Mir2861-201ENSMUST00000175539 82 ntBASIC19.21■□□□□ 0.67
Ush1gQ80T11 Gm18032-201ENSMUST00000222541 538 ntBASIC19.21■□□□□ 0.67
Ush1gQ80T11 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ush1gQ80T11 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ush1gQ80T11 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ush1gQ80T11 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ush1gQ80T11 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.21■□□□□ 0.67
Ush1gQ80T11 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ush1gQ80T11 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1gQ80T11 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1gQ80T11 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1gQ80T11 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1gQ80T11 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1gQ80T11 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1gQ80T11 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.2■□□□□ 0.66
Ush1gQ80T11 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.2■□□□□ 0.66
Ush1gQ80T11 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1gQ80T11 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1gQ80T11 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1gQ80T11 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1gQ80T11 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ush1gQ80T11 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ush1gQ80T11 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1gQ80T11 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1gQ80T11 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Ush1gQ80T11 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ush1gQ80T11 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.19■□□□□ 0.66
Ush1gQ80T11 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ush1gQ80T11 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ush1gQ80T11 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ush1gQ80T11 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ush1gQ80T11 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.18■□□□□ 0.66
Ush1gQ80T11 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ush1gQ80T11 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.18■□□□□ 0.66
Ush1gQ80T11 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ush1gQ80T11 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ush1gQ80T11 Mir5130-201ENSMUST00000175160 84 ntBASIC19.18■□□□□ 0.66
Ush1gQ80T11 Gm2274-201ENSMUST00000184539 609 ntBASIC19.18■□□□□ 0.66
Ush1gQ80T11 Gm33142-201ENSMUST00000193913 867 ntBASIC19.18■□□□□ 0.66
Ush1gQ80T11 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ush1gQ80T11 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ush1gQ80T11 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.18■□□□□ 0.66
Ush1gQ80T11 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ush1gQ80T11 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ush1gQ80T11 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ush1gQ80T11 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ush1gQ80T11 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ush1gQ80T11 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ush1gQ80T11 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ush1gQ80T11 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ush1gQ80T11 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.17■□□□□ 0.66
Ush1gQ80T11 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ush1gQ80T11 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.17■□□□□ 0.66
Ush1gQ80T11 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ush1gQ80T11 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ush1gQ80T11 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ush1gQ80T11 Gm27741-201ENSMUST00000185060 237 ntBASIC19.17■□□□□ 0.66
Ush1gQ80T11 Gm10517-202ENSMUST00000192970 758 ntBASIC19.17■□□□□ 0.66
Ush1gQ80T11 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ush1gQ80T11 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ush1gQ80T11 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ush1gQ80T11 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ush1gQ80T11 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.17■□□□□ 0.66
Ush1gQ80T11 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ush1gQ80T11 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ush1gQ80T11 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms