Protein–RNA interactions for Protein: Q80ST9

Lca5, Lebercilin, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lca5Q80ST9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.07■□□□□ 0.8
Lca5Q80ST9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Lca5Q80ST9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Lca5Q80ST9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lca5Q80ST9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Lca5Q80ST9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lca5Q80ST9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.07■□□□□ 0.8
Lca5Q80ST9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Lca5Q80ST9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lca5Q80ST9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Lca5Q80ST9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lca5Q80ST9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lca5Q80ST9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lca5Q80ST9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lca5Q80ST9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lca5Q80ST9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lca5Q80ST9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lca5Q80ST9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Lca5Q80ST9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lca5Q80ST9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.06■□□□□ 0.8
Lca5Q80ST9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Lca5Q80ST9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lca5Q80ST9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Lca5Q80ST9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lca5Q80ST9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lca5Q80ST9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.06■□□□□ 0.8
Lca5Q80ST9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lca5Q80ST9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lca5Q80ST9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lca5Q80ST9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lca5Q80ST9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lca5Q80ST9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lca5Q80ST9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lca5Q80ST9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lca5Q80ST9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lca5Q80ST9 Gm6433-201ENSMUST00000118634 875 ntBASIC20.05■□□□□ 0.8
Lca5Q80ST9 Gm7638-201ENSMUST00000121348 967 ntBASIC20.05■□□□□ 0.8
Lca5Q80ST9 Gm27463-201ENSMUST00000183569 57 ntBASIC20.05■□□□□ 0.8
Lca5Q80ST9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lca5Q80ST9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lca5Q80ST9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lca5Q80ST9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lca5Q80ST9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lca5Q80ST9 Grk6-206ENSMUST00000224995 2971 ntBASIC20.04■□□□□ 0.8
Lca5Q80ST9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lca5Q80ST9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lca5Q80ST9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Lca5Q80ST9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lca5Q80ST9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Lca5Q80ST9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.04■□□□□ 0.8
Lca5Q80ST9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lca5Q80ST9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lca5Q80ST9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lca5Q80ST9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lca5Q80ST9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.04■□□□□ 0.8
Lca5Q80ST9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Lca5Q80ST9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.04■□□□□ 0.8
Lca5Q80ST9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lca5Q80ST9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lca5Q80ST9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lca5Q80ST9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Lca5Q80ST9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lca5Q80ST9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lca5Q80ST9 Gm37025-201ENSMUST00000195159 829 ntBASIC20.03■□□□□ 0.8
Lca5Q80ST9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.03■□□□□ 0.8
Lca5Q80ST9 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.03■□□□□ 0.8
Lca5Q80ST9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lca5Q80ST9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lca5Q80ST9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.03■□□□□ 0.8
Lca5Q80ST9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lca5Q80ST9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lca5Q80ST9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lca5Q80ST9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Lca5Q80ST9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.02■□□□□ 0.8
Lca5Q80ST9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lca5Q80ST9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lca5Q80ST9 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.02■□□□□ 0.8
Lca5Q80ST9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lca5Q80ST9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lca5Q80ST9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lca5Q80ST9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Lca5Q80ST9 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.02■□□□□ 0.8
Lca5Q80ST9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Lca5Q80ST9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Lca5Q80ST9 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.02■□□□□ 0.79
Lca5Q80ST9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lca5Q80ST9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Lca5Q80ST9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.01■□□□□ 0.79
Lca5Q80ST9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lca5Q80ST9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.01■□□□□ 0.79
Lca5Q80ST9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lca5Q80ST9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lca5Q80ST9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.01■□□□□ 0.79
Lca5Q80ST9 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.01■□□□□ 0.79
Lca5Q80ST9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lca5Q80ST9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lca5Q80ST9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lca5Q80ST9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lca5Q80ST9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lca5Q80ST9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms