Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3d21Q7TSG5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.27■□□□□ 0.68
Sh3d21Q7TSG5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3d21Q7TSG5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Sh3d21Q7TSG5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Sh3d21Q7TSG5 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
Sh3d21Q7TSG5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sh3d21Q7TSG5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sh3d21Q7TSG5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sh3d21Q7TSG5 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Sh3d21Q7TSG5 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.26■□□□□ 0.67
Sh3d21Q7TSG5 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
Sh3d21Q7TSG5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3d21Q7TSG5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3d21Q7TSG5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Sh3d21Q7TSG5 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.26■□□□□ 0.67
Sh3d21Q7TSG5 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3d21Q7TSG5 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3d21Q7TSG5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Sh3d21Q7TSG5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3d21Q7TSG5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3d21Q7TSG5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3d21Q7TSG5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3d21Q7TSG5 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3d21Q7TSG5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
Sh3d21Q7TSG5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3d21Q7TSG5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3d21Q7TSG5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3d21Q7TSG5 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sh3d21Q7TSG5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3d21Q7TSG5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sh3d21Q7TSG5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Sh3d21Q7TSG5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.25■□□□□ 0.67
Sh3d21Q7TSG5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3d21Q7TSG5 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3d21Q7TSG5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3d21Q7TSG5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3d21Q7TSG5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Gm15375-201ENSMUST00000119510 849 ntBASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Mir2861-201ENSMUST00000175539 82 ntBASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d21Q7TSG5 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Idnk-204ENSMUST00000226010 1898 ntBASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Gm29791-202ENSMUST00000207888 369 ntBASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sh3d21Q7TSG5 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3d21Q7TSG5 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3d21Q7TSG5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3d21Q7TSG5 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3d21Q7TSG5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms