Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm8Q6ZWM4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm8Q6ZWM4 Gm10653-202ENSMUST00000139570 835 ntBASIC18.47■□□□□ 0.55
Lsm8Q6ZWM4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm8Q6ZWM4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.47■□□□□ 0.55
Lsm8Q6ZWM4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm8Q6ZWM4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.47■□□□□ 0.55
Lsm8Q6ZWM4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm8Q6ZWM4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm8Q6ZWM4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Gm37292-201ENSMUST00000192062 758 ntBASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm8Q6ZWM4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Lsm8Q6ZWM4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Lsm8Q6ZWM4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Lsm8Q6ZWM4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm8Q6ZWM4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.45■□□□□ 0.54
Lsm8Q6ZWM4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm8Q6ZWM4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm8Q6ZWM4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Lsm8Q6ZWM4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm8Q6ZWM4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm8Q6ZWM4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm8Q6ZWM4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm8Q6ZWM4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Lsm8Q6ZWM4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
Lsm8Q6ZWM4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm8Q6ZWM4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.44■□□□□ 0.54
Lsm8Q6ZWM4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.44■□□□□ 0.54
Lsm8Q6ZWM4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm8Q6ZWM4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Lsm8Q6ZWM4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm8Q6ZWM4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm8Q6ZWM4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.43■□□□□ 0.54
Lsm8Q6ZWM4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm8Q6ZWM4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Lsm8Q6ZWM4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm8Q6ZWM4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm8Q6ZWM4 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.43■□□□□ 0.54
Lsm8Q6ZWM4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.43■□□□□ 0.54
Lsm8Q6ZWM4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm8Q6ZWM4 Gm15378-201ENSMUST00000121894 207 ntBASIC18.43■□□□□ 0.54
Lsm8Q6ZWM4 Gm12382-201ENSMUST00000122005 922 ntBASIC18.43■□□□□ 0.54
Lsm8Q6ZWM4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm8Q6ZWM4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm8Q6ZWM4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm8Q6ZWM4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm8Q6ZWM4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Lsm8Q6ZWM4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Lsm8Q6ZWM4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Lsm8Q6ZWM4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm8Q6ZWM4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm8Q6ZWM4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm8Q6ZWM4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm8Q6ZWM4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.42■□□□□ 0.54
Lsm8Q6ZWM4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.42■□□□□ 0.54
Lsm8Q6ZWM4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Lsm8Q6ZWM4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm8Q6ZWM4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm8Q6ZWM4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm8Q6ZWM4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Lsm8Q6ZWM4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm8Q6ZWM4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm8Q6ZWM4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Lsm8Q6ZWM4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm8Q6ZWM4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm8Q6ZWM4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm8Q6ZWM4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm8Q6ZWM4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm8Q6ZWM4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm8Q6ZWM4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm8Q6ZWM4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.41■□□□□ 0.54
Lsm8Q6ZWM4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm8Q6ZWM4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm8Q6ZWM4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm8Q6ZWM4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm8Q6ZWM4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm8Q6ZWM4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm8Q6ZWM4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms