Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Kdm1aQ6ZQ88 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Kdm1aQ6ZQ88 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Kdm1aQ6ZQ88 Mtag2-201ENSMUST00000058665 714 ntBASIC19.47■□□□□ 0.71
Kdm1aQ6ZQ88 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Kdm1aQ6ZQ88 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Kdm1aQ6ZQ88 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Kdm1aQ6ZQ88 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Kdm1aQ6ZQ88 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Kdm1aQ6ZQ88 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Kdm1aQ6ZQ88 Mir2861-201ENSMUST00000175539 82 ntBASIC19.46■□□□□ 0.71
Kdm1aQ6ZQ88 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Kdm1aQ6ZQ88 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Kdm1aQ6ZQ88 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.46■□□□□ 0.71
Kdm1aQ6ZQ88 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Kdm1aQ6ZQ88 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Kdm1aQ6ZQ88 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Kdm1aQ6ZQ88 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Kdm1aQ6ZQ88 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Kdm1aQ6ZQ88 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.45■□□□□ 0.7
Kdm1aQ6ZQ88 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Kdm1aQ6ZQ88 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.45■□□□□ 0.7
Kdm1aQ6ZQ88 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.45■□□□□ 0.7
Kdm1aQ6ZQ88 Gm4968-201ENSMUST00000071458 858 ntBASIC19.45■□□□□ 0.7
Kdm1aQ6ZQ88 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Kdm1aQ6ZQ88 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.45■□□□□ 0.7
Kdm1aQ6ZQ88 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Kdm1aQ6ZQ88 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Kdm1aQ6ZQ88 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Kdm1aQ6ZQ88 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Kdm1aQ6ZQ88 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Kdm1aQ6ZQ88 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Kdm1aQ6ZQ88 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kdm1aQ6ZQ88 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kdm1aQ6ZQ88 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kdm1aQ6ZQ88 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kdm1aQ6ZQ88 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Kdm1aQ6ZQ88 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.43■□□□□ 0.7
Kdm1aQ6ZQ88 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kdm1aQ6ZQ88 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.43■□□□□ 0.7
Kdm1aQ6ZQ88 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kdm1aQ6ZQ88 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.43■□□□□ 0.7
Kdm1aQ6ZQ88 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.43■□□□□ 0.7
Kdm1aQ6ZQ88 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kdm1aQ6ZQ88 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kdm1aQ6ZQ88 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kdm1aQ6ZQ88 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kdm1aQ6ZQ88 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kdm1aQ6ZQ88 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kdm1aQ6ZQ88 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kdm1aQ6ZQ88 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kdm1aQ6ZQ88 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kdm1aQ6ZQ88 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Kdm1aQ6ZQ88 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Kdm1aQ6ZQ88 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kdm1aQ6ZQ88 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Kdm1aQ6ZQ88 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.42■□□□□ 0.7
Kdm1aQ6ZQ88 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kdm1aQ6ZQ88 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kdm1aQ6ZQ88 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kdm1aQ6ZQ88 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Kdm1aQ6ZQ88 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.42■□□□□ 0.7
Kdm1aQ6ZQ88 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kdm1aQ6ZQ88 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kdm1aQ6ZQ88 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kdm1aQ6ZQ88 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kdm1aQ6ZQ88 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Kdm1aQ6ZQ88 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Kdm1aQ6ZQ88 Dio3-201ENSMUST00000097228 1449 ntBASIC19.42■□□□□ 0.7
Kdm1aQ6ZQ88 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kdm1aQ6ZQ88 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Kdm1aQ6ZQ88 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Kdm1aQ6ZQ88 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Kdm1aQ6ZQ88 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Kdm1aQ6ZQ88 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Kdm1aQ6ZQ88 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Kdm1aQ6ZQ88 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.41■□□□□ 0.7
Kdm1aQ6ZQ88 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.41■□□□□ 0.7
Kdm1aQ6ZQ88 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.41■□□□□ 0.7
Kdm1aQ6ZQ88 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms