Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx55Q6ZPL9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ddx55Q6ZPL9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ddx55Q6ZPL9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Ddx55Q6ZPL9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.07■□□□□ 0.8
Ddx55Q6ZPL9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx55Q6ZPL9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx55Q6ZPL9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ddx55Q6ZPL9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx55Q6ZPL9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx55Q6ZPL9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.06■□□□□ 0.8
Ddx55Q6ZPL9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.06■□□□□ 0.8
Ddx55Q6ZPL9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx55Q6ZPL9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx55Q6ZPL9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx55Q6ZPL9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx55Q6ZPL9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx55Q6ZPL9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Ddx55Q6ZPL9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx55Q6ZPL9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx55Q6ZPL9 Mir770-201ENSMUST00000103252 94 ntBASIC20.05■□□□□ 0.8
Ddx55Q6ZPL9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx55Q6ZPL9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ddx55Q6ZPL9 Gm6623-201ENSMUST00000173570 544 ntBASIC20.05■□□□□ 0.8
Ddx55Q6ZPL9 Gm37722-201ENSMUST00000193757 208 ntBASIC20.05■□□□□ 0.8
Ddx55Q6ZPL9 Gm44771-201ENSMUST00000206975 626 ntBASIC20.05■□□□□ 0.8
Ddx55Q6ZPL9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Ddx55Q6ZPL9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Ddx55Q6ZPL9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx55Q6ZPL9 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.04■□□□□ 0.8
Ddx55Q6ZPL9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx55Q6ZPL9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx55Q6ZPL9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Ddx55Q6ZPL9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx55Q6ZPL9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx55Q6ZPL9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx55Q6ZPL9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx55Q6ZPL9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.04■□□□□ 0.8
Ddx55Q6ZPL9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx55Q6ZPL9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx55Q6ZPL9 Gm18115-201ENSMUST00000221209 621 ntBASIC20.04■□□□□ 0.8
Ddx55Q6ZPL9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx55Q6ZPL9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx55Q6ZPL9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx55Q6ZPL9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx55Q6ZPL9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx55Q6ZPL9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx55Q6ZPL9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx55Q6ZPL9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx55Q6ZPL9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx55Q6ZPL9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx55Q6ZPL9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx55Q6ZPL9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx55Q6ZPL9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx55Q6ZPL9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx55Q6ZPL9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ddx55Q6ZPL9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ddx55Q6ZPL9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx55Q6ZPL9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx55Q6ZPL9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx55Q6ZPL9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx55Q6ZPL9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx55Q6ZPL9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx55Q6ZPL9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Ddx55Q6ZPL9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ddx55Q6ZPL9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ddx55Q6ZPL9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx55Q6ZPL9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx55Q6ZPL9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx55Q6ZPL9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Ddx55Q6ZPL9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.02■□□□□ 0.79
Ddx55Q6ZPL9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx55Q6ZPL9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx55Q6ZPL9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx55Q6ZPL9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx55Q6ZPL9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx55Q6ZPL9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx55Q6ZPL9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx55Q6ZPL9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx55Q6ZPL9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx55Q6ZPL9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx55Q6ZPL9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx55Q6ZPL9 Gm24589-201ENSMUST00000116692 94 ntBASIC20.01■□□□□ 0.79
Ddx55Q6ZPL9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.01■□□□□ 0.79
Ddx55Q6ZPL9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx55Q6ZPL9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.01■□□□□ 0.79
Ddx55Q6ZPL9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx55Q6ZPL9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Ddx55Q6ZPL9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Ddx55Q6ZPL9 Gm43213-201ENSMUST00000151866 1790 ntBASIC20■□□□□ 0.79
Ddx55Q6ZPL9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx55Q6ZPL9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx55Q6ZPL9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx55Q6ZPL9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx55Q6ZPL9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx55Q6ZPL9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ddx55Q6ZPL9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx55Q6ZPL9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx55Q6ZPL9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ddx55Q6ZPL9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms