Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Casc1Q6TDU8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Casc1Q6TDU8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Casc1Q6TDU8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Casc1Q6TDU8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC21.01■□□□□ 0.95
Casc1Q6TDU8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Casc1Q6TDU8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.01■□□□□ 0.95
Casc1Q6TDU8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Casc1Q6TDU8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Casc1Q6TDU8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.01■□□□□ 0.95
Casc1Q6TDU8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Casc1Q6TDU8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Casc1Q6TDU8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.01■□□□□ 0.95
Casc1Q6TDU8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Casc1Q6TDU8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Casc1Q6TDU8 Gm12527-201ENSMUST00000117967 564 ntBASIC21■□□□□ 0.95
Casc1Q6TDU8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Casc1Q6TDU8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Casc1Q6TDU8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21■□□□□ 0.95
Casc1Q6TDU8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21■□□□□ 0.95
Casc1Q6TDU8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Casc1Q6TDU8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Casc1Q6TDU8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Casc1Q6TDU8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Casc1Q6TDU8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Casc1Q6TDU8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC21■□□□□ 0.95
Casc1Q6TDU8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Casc1Q6TDU8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Casc1Q6TDU8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Casc1Q6TDU8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.99■□□□□ 0.95
Casc1Q6TDU8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Casc1Q6TDU8 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.99■□□□□ 0.95
Casc1Q6TDU8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Casc1Q6TDU8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Casc1Q6TDU8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.99■□□□□ 0.95
Casc1Q6TDU8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Casc1Q6TDU8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
Casc1Q6TDU8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Casc1Q6TDU8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC20.99■□□□□ 0.95
Casc1Q6TDU8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Casc1Q6TDU8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Casc1Q6TDU8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Casc1Q6TDU8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Casc1Q6TDU8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.98■□□□□ 0.95
Casc1Q6TDU8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Casc1Q6TDU8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.98■□□□□ 0.95
Casc1Q6TDU8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.98■□□□□ 0.95
Casc1Q6TDU8 Gm20049-201ENSMUST00000219950 730 ntBASIC20.98■□□□□ 0.95
Casc1Q6TDU8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Casc1Q6TDU8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Casc1Q6TDU8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Casc1Q6TDU8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Casc1Q6TDU8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Casc1Q6TDU8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Casc1Q6TDU8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.97■□□□□ 0.95
Casc1Q6TDU8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Casc1Q6TDU8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Casc1Q6TDU8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Casc1Q6TDU8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Casc1Q6TDU8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Casc1Q6TDU8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Casc1Q6TDU8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Casc1Q6TDU8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Casc1Q6TDU8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Casc1Q6TDU8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Casc1Q6TDU8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Casc1Q6TDU8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Casc1Q6TDU8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Casc1Q6TDU8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Casc1Q6TDU8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Casc1Q6TDU8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Casc1Q6TDU8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Casc1Q6TDU8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Casc1Q6TDU8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Casc1Q6TDU8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Casc1Q6TDU8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.96■□□□□ 0.95
Casc1Q6TDU8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
Casc1Q6TDU8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Casc1Q6TDU8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Casc1Q6TDU8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Casc1Q6TDU8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Casc1Q6TDU8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Casc1Q6TDU8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Casc1Q6TDU8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Casc1Q6TDU8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Casc1Q6TDU8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Casc1Q6TDU8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.95■□□□□ 0.94
Casc1Q6TDU8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Casc1Q6TDU8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Casc1Q6TDU8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.95■□□□□ 0.94
Casc1Q6TDU8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.95■□□□□ 0.94
Casc1Q6TDU8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Casc1Q6TDU8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Casc1Q6TDU8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Casc1Q6TDU8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Casc1Q6TDU8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Casc1Q6TDU8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Casc1Q6TDU8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Casc1Q6TDU8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Casc1Q6TDU8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms