Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rif1Q6PR54 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rif1Q6PR54 Gm4995-201ENSMUST00000117247 432 ntBASIC14.8□□□□□ -0.04
Rif1Q6PR54 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rif1Q6PR54 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rif1Q6PR54 Gm44872-201ENSMUST00000207864 420 ntBASIC14.8□□□□□ -0.04
Rif1Q6PR54 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.8□□□□□ -0.04
Rif1Q6PR54 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rif1Q6PR54 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.8□□□□□ -0.04
Rif1Q6PR54 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rif1Q6PR54 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rif1Q6PR54 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rif1Q6PR54 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
Rif1Q6PR54 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rif1Q6PR54 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rif1Q6PR54 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rif1Q6PR54 Gm7862-201ENSMUST00000121461 292 ntBASIC14.8□□□□□ -0.04
Rif1Q6PR54 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rif1Q6PR54 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.8□□□□□ -0.04
Rif1Q6PR54 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.8□□□□□ -0.04
Rif1Q6PR54 Gm10566-201ENSMUST00000086739 996 ntBASIC14.8□□□□□ -0.04
Rif1Q6PR54 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC14.79□□□□□ -0.04
Rif1Q6PR54 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rif1Q6PR54 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rif1Q6PR54 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rif1Q6PR54 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rif1Q6PR54 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rif1Q6PR54 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rif1Q6PR54 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rif1Q6PR54 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.79□□□□□ -0.04
Rif1Q6PR54 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.79□□□□□ -0.04
Rif1Q6PR54 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rif1Q6PR54 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rif1Q6PR54 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.79□□□□□ -0.04
Rif1Q6PR54 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.79□□□□□ -0.04
Rif1Q6PR54 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rif1Q6PR54 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rif1Q6PR54 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rif1Q6PR54 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rif1Q6PR54 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rif1Q6PR54 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rif1Q6PR54 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.79□□□□□ -0.04
Rif1Q6PR54 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rif1Q6PR54 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rif1Q6PR54 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rif1Q6PR54 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rif1Q6PR54 Gm15372-201ENSMUST00000120729 834 ntBASIC14.77□□□□□ -0.04
Rif1Q6PR54 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.77□□□□□ -0.04
Rif1Q6PR54 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.77□□□□□ -0.04
Rif1Q6PR54 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rif1Q6PR54 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rif1Q6PR54 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rif1Q6PR54 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.77□□□□□ -0.04
Rif1Q6PR54 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rif1Q6PR54 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rif1Q6PR54 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rif1Q6PR54 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rif1Q6PR54 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rif1Q6PR54 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rif1Q6PR54 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Rif1Q6PR54 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rif1Q6PR54 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.77□□□□□ -0.05
Rif1Q6PR54 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rif1Q6PR54 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC14.77□□□□□ -0.05
Rif1Q6PR54 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rif1Q6PR54 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rif1Q6PR54 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rif1Q6PR54 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rif1Q6PR54 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rif1Q6PR54 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.77□□□□□ -0.05
Rif1Q6PR54 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
Rif1Q6PR54 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rif1Q6PR54 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rif1Q6PR54 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rif1Q6PR54 Gm27397-201ENSMUST00000184997 107 ntBASIC14.76□□□□□ -0.05
Rif1Q6PR54 Gm37722-201ENSMUST00000193757 208 ntBASIC14.76□□□□□ -0.05
Rif1Q6PR54 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rif1Q6PR54 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rif1Q6PR54 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms