Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prrt3Q6PE13 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.45■□□□□ 0.54
Prrt3Q6PE13 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Prrt3Q6PE13 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prrt3Q6PE13 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prrt3Q6PE13 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prrt3Q6PE13 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.45■□□□□ 0.54
Prrt3Q6PE13 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prrt3Q6PE13 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prrt3Q6PE13 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prrt3Q6PE13 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prrt3Q6PE13 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.45■□□□□ 0.54
Prrt3Q6PE13 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prrt3Q6PE13 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Prrt3Q6PE13 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Prrt3Q6PE13 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.44■□□□□ 0.54
Prrt3Q6PE13 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Prrt3Q6PE13 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prrt3Q6PE13 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Prrt3Q6PE13 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Prrt3Q6PE13 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Prrt3Q6PE13 Gm6659-201ENSMUST00000174752 547 ntBASIC18.44■□□□□ 0.54
Prrt3Q6PE13 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.44■□□□□ 0.54
Prrt3Q6PE13 Gm27463-201ENSMUST00000183569 57 ntBASIC18.44■□□□□ 0.54
Prrt3Q6PE13 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Prrt3Q6PE13 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.44■□□□□ 0.54
Prrt3Q6PE13 Gm18959-201ENSMUST00000208954 655 ntBASIC18.44■□□□□ 0.54
Prrt3Q6PE13 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prrt3Q6PE13 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Prrt3Q6PE13 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prrt3Q6PE13 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prrt3Q6PE13 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prrt3Q6PE13 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Prrt3Q6PE13 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Prrt3Q6PE13 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Prrt3Q6PE13 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Prrt3Q6PE13 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.43■□□□□ 0.54
Prrt3Q6PE13 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prrt3Q6PE13 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prrt3Q6PE13 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Prrt3Q6PE13 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prrt3Q6PE13 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prrt3Q6PE13 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prrt3Q6PE13 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prrt3Q6PE13 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prrt3Q6PE13 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prrt3Q6PE13 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Prrt3Q6PE13 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prrt3Q6PE13 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Prrt3Q6PE13 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prrt3Q6PE13 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.42■□□□□ 0.54
Prrt3Q6PE13 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prrt3Q6PE13 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prrt3Q6PE13 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prrt3Q6PE13 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prrt3Q6PE13 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prrt3Q6PE13 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Prrt3Q6PE13 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prrt3Q6PE13 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.42■□□□□ 0.54
Prrt3Q6PE13 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prrt3Q6PE13 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Prrt3Q6PE13 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.42■□□□□ 0.54
Prrt3Q6PE13 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prrt3Q6PE13 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Prrt3Q6PE13 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prrt3Q6PE13 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prrt3Q6PE13 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prrt3Q6PE13 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prrt3Q6PE13 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prrt3Q6PE13 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.41■□□□□ 0.54
Prrt3Q6PE13 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prrt3Q6PE13 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prrt3Q6PE13 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Prrt3Q6PE13 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.41■□□□□ 0.54
Prrt3Q6PE13 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prrt3Q6PE13 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Prrt3Q6PE13 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Prrt3Q6PE13 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prrt3Q6PE13 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.4■□□□□ 0.54
Prrt3Q6PE13 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.4■□□□□ 0.54
Prrt3Q6PE13 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prrt3Q6PE13 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prrt3Q6PE13 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Prrt3Q6PE13 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prrt3Q6PE13 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prrt3Q6PE13 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prrt3Q6PE13 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prrt3Q6PE13 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prrt3Q6PE13 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Prrt3Q6PE13 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Prrt3Q6PE13 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Prrt3Q6PE13 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prrt3Q6PE13 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prrt3Q6PE13 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.39■□□□□ 0.53
Prrt3Q6PE13 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prrt3Q6PE13 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Prrt3Q6PE13 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Prrt3Q6PE13 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.39■□□□□ 0.53
Prrt3Q6PE13 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Prrt3Q6PE13 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms