Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf220Q6PDX6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf220Q6PDX6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf220Q6PDX6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf220Q6PDX6 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf220Q6PDX6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.67■□□□□ 0.26
Rnf220Q6PDX6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf220Q6PDX6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf220Q6PDX6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf220Q6PDX6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf220Q6PDX6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf220Q6PDX6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf220Q6PDX6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.67■□□□□ 0.26
Rnf220Q6PDX6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf220Q6PDX6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf220Q6PDX6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf220Q6PDX6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf220Q6PDX6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf220Q6PDX6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf220Q6PDX6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rnf220Q6PDX6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf220Q6PDX6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf220Q6PDX6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
Rnf220Q6PDX6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rnf220Q6PDX6 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.65■□□□□ 0.26
Rnf220Q6PDX6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf220Q6PDX6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rnf220Q6PDX6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf220Q6PDX6 Gm27801-201ENSMUST00000184174 223 ntBASIC16.65■□□□□ 0.26
Rnf220Q6PDX6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf220Q6PDX6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rnf220Q6PDX6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf220Q6PDX6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.65■□□□□ 0.26
Rnf220Q6PDX6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rnf220Q6PDX6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf220Q6PDX6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf220Q6PDX6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf220Q6PDX6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf220Q6PDX6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Rnf220Q6PDX6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Gm8493-201ENSMUST00000196881 489 ntBASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf220Q6PDX6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf220Q6PDX6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf220Q6PDX6 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf220Q6PDX6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf220Q6PDX6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms