Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcc2Q6PDG5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcc2Q6PDG5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcc2Q6PDG5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcc2Q6PDG5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcc2Q6PDG5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcc2Q6PDG5 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcc2Q6PDG5 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcc2Q6PDG5 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.5■□□□□ 0.87
Smarcc2Q6PDG5 Mir8112-201ENSMUST00000184382 131 ntBASIC20.5■□□□□ 0.87
Smarcc2Q6PDG5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.5■□□□□ 0.87
Smarcc2Q6PDG5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.5■□□□□ 0.87
Smarcc2Q6PDG5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.5■□□□□ 0.87
Smarcc2Q6PDG5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcc2Q6PDG5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcc2Q6PDG5 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcc2Q6PDG5 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcc2Q6PDG5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcc2Q6PDG5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcc2Q6PDG5 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.49■□□□□ 0.87
Smarcc2Q6PDG5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.49■□□□□ 0.87
Smarcc2Q6PDG5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcc2Q6PDG5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.49■□□□□ 0.87
Smarcc2Q6PDG5 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcc2Q6PDG5 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcc2Q6PDG5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.49■□□□□ 0.87
Smarcc2Q6PDG5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcc2Q6PDG5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.49■□□□□ 0.87
Smarcc2Q6PDG5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Smarcc2Q6PDG5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.48■□□□□ 0.87
Smarcc2Q6PDG5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Smarcc2Q6PDG5 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcc2Q6PDG5 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Smarcc2Q6PDG5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcc2Q6PDG5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Smarcc2Q6PDG5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcc2Q6PDG5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcc2Q6PDG5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcc2Q6PDG5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcc2Q6PDG5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcc2Q6PDG5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.47■□□□□ 0.87
Smarcc2Q6PDG5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcc2Q6PDG5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcc2Q6PDG5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcc2Q6PDG5 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcc2Q6PDG5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Smarcc2Q6PDG5 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.47■□□□□ 0.87
Smarcc2Q6PDG5 Gm15378-201ENSMUST00000121894 207 ntBASIC20.47■□□□□ 0.87
Smarcc2Q6PDG5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcc2Q6PDG5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcc2Q6PDG5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.47■□□□□ 0.87
Smarcc2Q6PDG5 Gm10698-201ENSMUST00000182663 604 ntBASIC20.47■□□□□ 0.87
Smarcc2Q6PDG5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcc2Q6PDG5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcc2Q6PDG5 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.47■□□□□ 0.87
Smarcc2Q6PDG5 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.47■□□□□ 0.87
Smarcc2Q6PDG5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcc2Q6PDG5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcc2Q6PDG5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcc2Q6PDG5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcc2Q6PDG5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Smarcc2Q6PDG5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcc2Q6PDG5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Smarcc2Q6PDG5 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.46■□□□□ 0.87
Smarcc2Q6PDG5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcc2Q6PDG5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcc2Q6PDG5 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcc2Q6PDG5 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.46■□□□□ 0.87
Smarcc2Q6PDG5 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcc2Q6PDG5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcc2Q6PDG5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcc2Q6PDG5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcc2Q6PDG5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.46■□□□□ 0.87
Smarcc2Q6PDG5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcc2Q6PDG5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.46■□□□□ 0.87
Smarcc2Q6PDG5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.46■□□□□ 0.87
Smarcc2Q6PDG5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcc2Q6PDG5 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcc2Q6PDG5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Smarcc2Q6PDG5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcc2Q6PDG5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcc2Q6PDG5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcc2Q6PDG5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcc2Q6PDG5 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcc2Q6PDG5 Gm10418-201ENSMUST00000100943 576 ntBASIC20.45■□□□□ 0.86
Smarcc2Q6PDG5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcc2Q6PDG5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcc2Q6PDG5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcc2Q6PDG5 Gm10138-203ENSMUST00000206952 366 ntBASIC20.45■□□□□ 0.86
Smarcc2Q6PDG5 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Smarcc2Q6PDG5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcc2Q6PDG5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcc2Q6PDG5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcc2Q6PDG5 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcc2Q6PDG5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Smarcc2Q6PDG5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcc2Q6PDG5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcc2Q6PDG5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcc2Q6PDG5 Gm13401-201ENSMUST00000117074 291 ntBASIC20.44■□□□□ 0.86
Smarcc2Q6PDG5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms