Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smchd1Q6P5D8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smchd1Q6P5D8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smchd1Q6P5D8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smchd1Q6P5D8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smchd1Q6P5D8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smchd1Q6P5D8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Smchd1Q6P5D8 Gm7791-201ENSMUST00000219066 539 ntBASIC19.36■□□□□ 0.69
Smchd1Q6P5D8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smchd1Q6P5D8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smchd1Q6P5D8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smchd1Q6P5D8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.36■□□□□ 0.69
Smchd1Q6P5D8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.36■□□□□ 0.69
Smchd1Q6P5D8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smchd1Q6P5D8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smchd1Q6P5D8 Gm24841-201ENSMUST00000158676 357 ntBASIC19.35■□□□□ 0.69
Smchd1Q6P5D8 Gm45058-201ENSMUST00000205810 766 ntBASIC19.35■□□□□ 0.69
Smchd1Q6P5D8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smchd1Q6P5D8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.35■□□□□ 0.69
Smchd1Q6P5D8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smchd1Q6P5D8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smchd1Q6P5D8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smchd1Q6P5D8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smchd1Q6P5D8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Smchd1Q6P5D8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smchd1Q6P5D8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Smchd1Q6P5D8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Smchd1Q6P5D8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smchd1Q6P5D8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Smchd1Q6P5D8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smchd1Q6P5D8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smchd1Q6P5D8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smchd1Q6P5D8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.35■□□□□ 0.69
Smchd1Q6P5D8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smchd1Q6P5D8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Smchd1Q6P5D8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Smchd1Q6P5D8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Smchd1Q6P5D8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smchd1Q6P5D8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smchd1Q6P5D8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Smchd1Q6P5D8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smchd1Q6P5D8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Smchd1Q6P5D8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.34■□□□□ 0.69
Smchd1Q6P5D8 Mir8112-201ENSMUST00000184382 131 ntBASIC19.34■□□□□ 0.69
Smchd1Q6P5D8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.34■□□□□ 0.69
Smchd1Q6P5D8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smchd1Q6P5D8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Smchd1Q6P5D8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smchd1Q6P5D8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.33■□□□□ 0.68
Smchd1Q6P5D8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.33■□□□□ 0.68
Smchd1Q6P5D8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Smchd1Q6P5D8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.33■□□□□ 0.68
Smchd1Q6P5D8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.33■□□□□ 0.68
Smchd1Q6P5D8 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.33■□□□□ 0.68
Smchd1Q6P5D8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.33■□□□□ 0.68
Smchd1Q6P5D8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smchd1Q6P5D8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.33■□□□□ 0.68
Smchd1Q6P5D8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smchd1Q6P5D8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.33■□□□□ 0.68
Smchd1Q6P5D8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.33■□□□□ 0.68
Smchd1Q6P5D8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smchd1Q6P5D8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.33■□□□□ 0.68
Smchd1Q6P5D8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.32■□□□□ 0.68
Smchd1Q6P5D8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Smchd1Q6P5D8 Gm23634-201ENSMUST00000175071 91 ntBASIC19.32■□□□□ 0.68
Smchd1Q6P5D8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smchd1Q6P5D8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.32■□□□□ 0.68
Smchd1Q6P5D8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smchd1Q6P5D8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smchd1Q6P5D8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smchd1Q6P5D8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Smchd1Q6P5D8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smchd1Q6P5D8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smchd1Q6P5D8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smchd1Q6P5D8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smchd1Q6P5D8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smchd1Q6P5D8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smchd1Q6P5D8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smchd1Q6P5D8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smchd1Q6P5D8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.32■□□□□ 0.68
Smchd1Q6P5D8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smchd1Q6P5D8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smchd1Q6P5D8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smchd1Q6P5D8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smchd1Q6P5D8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smchd1Q6P5D8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smchd1Q6P5D8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smchd1Q6P5D8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smchd1Q6P5D8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smchd1Q6P5D8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Smchd1Q6P5D8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smchd1Q6P5D8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smchd1Q6P5D8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smchd1Q6P5D8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smchd1Q6P5D8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Smchd1Q6P5D8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smchd1Q6P5D8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.3■□□□□ 0.68
Smchd1Q6P5D8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smchd1Q6P5D8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smchd1Q6P5D8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms