Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Sp140Q6NSQ5 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sp140Q6NSQ5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sp140Q6NSQ5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sp140Q6NSQ5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sp140Q6NSQ5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sp140Q6NSQ5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sp140Q6NSQ5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Sp140Q6NSQ5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.85■□□□□ 0.45
Sp140Q6NSQ5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sp140Q6NSQ5 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sp140Q6NSQ5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 Gm13401-201ENSMUST00000117074 291 ntBASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sp140Q6NSQ5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.83■□□□□ 0.45
Sp140Q6NSQ5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Sp140Q6NSQ5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Sp140Q6NSQ5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sp140Q6NSQ5 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Sp140Q6NSQ5 Gm27275-201ENSMUST00000184318 272 ntBASIC17.83■□□□□ 0.44
Sp140Q6NSQ5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sp140Q6NSQ5 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sp140Q6NSQ5 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.83■□□□□ 0.44
Sp140Q6NSQ5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Sp140Q6NSQ5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sp140Q6NSQ5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sp140Q6NSQ5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sp140Q6NSQ5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Sp140Q6NSQ5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.83■□□□□ 0.44
Sp140Q6NSQ5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sp140Q6NSQ5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sp140Q6NSQ5 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sp140Q6NSQ5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.82■□□□□ 0.44
Sp140Q6NSQ5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sp140Q6NSQ5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sp140Q6NSQ5 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sp140Q6NSQ5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sp140Q6NSQ5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sp140Q6NSQ5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sp140Q6NSQ5 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.82■□□□□ 0.44
Sp140Q6NSQ5 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.82■□□□□ 0.44
Sp140Q6NSQ5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.82■□□□□ 0.44
Sp140Q6NSQ5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sp140Q6NSQ5 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.82■□□□□ 0.44
Sp140Q6NSQ5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sp140Q6NSQ5 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Sp140Q6NSQ5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Sp140Q6NSQ5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sp140Q6NSQ5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sp140Q6NSQ5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.81■□□□□ 0.44
Sp140Q6NSQ5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Sp140Q6NSQ5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.81■□□□□ 0.44
Sp140Q6NSQ5 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.81■□□□□ 0.44
Sp140Q6NSQ5 Mir8112-201ENSMUST00000184382 131 ntBASIC17.81■□□□□ 0.44
Sp140Q6NSQ5 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Sp140Q6NSQ5 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sp140Q6NSQ5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sp140Q6NSQ5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.81■□□□□ 0.44
Sp140Q6NSQ5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sp140Q6NSQ5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sp140Q6NSQ5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Sp140Q6NSQ5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sp140Q6NSQ5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sp140Q6NSQ5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sp140Q6NSQ5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sp140Q6NSQ5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sp140Q6NSQ5 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.8■□□□□ 0.44
Sp140Q6NSQ5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sp140Q6NSQ5 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sp140Q6NSQ5 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sp140Q6NSQ5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sp140Q6NSQ5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sp140Q6NSQ5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.8■□□□□ 0.44
Sp140Q6NSQ5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sp140Q6NSQ5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sp140Q6NSQ5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Sp140Q6NSQ5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms