Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga7Q6DD96 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga7Q6DD96 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhga7Q6DD96 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga7Q6DD96 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga7Q6DD96 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga7Q6DD96 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.05■□□□□ 0.32
Pcdhga7Q6DD96 Gm44549-201ENSMUST00000208351 577 ntBASIC17.05■□□□□ 0.32
Pcdhga7Q6DD96 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga7Q6DD96 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga7Q6DD96 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga7Q6DD96 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga7Q6DD96 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga7Q6DD96 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga7Q6DD96 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga7Q6DD96 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga7Q6DD96 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga7Q6DD96 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga7Q6DD96 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhga7Q6DD96 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga7Q6DD96 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga7Q6DD96 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.04■□□□□ 0.32
Pcdhga7Q6DD96 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Pcdhga7Q6DD96 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhga7Q6DD96 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga7Q6DD96 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga7Q6DD96 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga7Q6DD96 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga7Q6DD96 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga7Q6DD96 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga7Q6DD96 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga7Q6DD96 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhga7Q6DD96 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 Gm26524-201ENSMUST00000192339 390 ntBASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 Zfp783-201ENSMUST00000095946 670 ntBASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhga7Q6DD96 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhga7Q6DD96 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga7Q6DD96 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga7Q6DD96 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga7Q6DD96 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.02■□□□□ 0.32
Pcdhga7Q6DD96 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga7Q6DD96 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Pcdhga7Q6DD96 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga7Q6DD96 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga7Q6DD96 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga7Q6DD96 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.02■□□□□ 0.32
Pcdhga7Q6DD96 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhga7Q6DD96 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Gm27405-201ENSMUST00000184201 112 ntBASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.01■□□□□ 0.31
Pcdhga7Q6DD96 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga7Q6DD96 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga7Q6DD96 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga7Q6DD96 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga7Q6DD96 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga7Q6DD96 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms