Protein–RNA interactions for Protein: Q68FE2

Atg9a, Autophagy-related protein 9A, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg9aQ68FE2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atg9aQ68FE2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Atg9aQ68FE2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atg9aQ68FE2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Atg9aQ68FE2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Atg9aQ68FE2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atg9aQ68FE2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atg9aQ68FE2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atg9aQ68FE2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atg9aQ68FE2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.23■□□□□ 0.99
Atg9aQ68FE2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Atg9aQ68FE2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.22■□□□□ 0.99
Atg9aQ68FE2 AC159205.6-201ENSMUST00000224935 887 ntBASIC21.22■□□□□ 0.99
Atg9aQ68FE2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atg9aQ68FE2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atg9aQ68FE2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atg9aQ68FE2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atg9aQ68FE2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Atg9aQ68FE2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atg9aQ68FE2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atg9aQ68FE2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atg9aQ68FE2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Atg9aQ68FE2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Atg9aQ68FE2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC21.21■□□□□ 0.99
Atg9aQ68FE2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Atg9aQ68FE2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atg9aQ68FE2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atg9aQ68FE2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Atg9aQ68FE2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atg9aQ68FE2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atg9aQ68FE2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atg9aQ68FE2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.21■□□□□ 0.99
Atg9aQ68FE2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.21■□□□□ 0.99
Atg9aQ68FE2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atg9aQ68FE2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atg9aQ68FE2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Atg9aQ68FE2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.2■□□□□ 0.98
Atg9aQ68FE2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Atg9aQ68FE2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atg9aQ68FE2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atg9aQ68FE2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atg9aQ68FE2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Atg9aQ68FE2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.2■□□□□ 0.98
Atg9aQ68FE2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atg9aQ68FE2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atg9aQ68FE2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atg9aQ68FE2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atg9aQ68FE2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atg9aQ68FE2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atg9aQ68FE2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atg9aQ68FE2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atg9aQ68FE2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atg9aQ68FE2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atg9aQ68FE2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.19■□□□□ 0.98
Atg9aQ68FE2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atg9aQ68FE2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atg9aQ68FE2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atg9aQ68FE2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Atg9aQ68FE2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atg9aQ68FE2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atg9aQ68FE2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atg9aQ68FE2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atg9aQ68FE2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atg9aQ68FE2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.18■□□□□ 0.98
Atg9aQ68FE2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC21.18■□□□□ 0.98
Atg9aQ68FE2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atg9aQ68FE2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Atg9aQ68FE2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Atg9aQ68FE2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
Atg9aQ68FE2 Gm37025-201ENSMUST00000195159 829 ntBASIC21.17■□□□□ 0.98
Atg9aQ68FE2 Gm18959-201ENSMUST00000208954 655 ntBASIC21.17■□□□□ 0.98
Atg9aQ68FE2 Gm9731-201ENSMUST00000209480 747 ntBASIC21.17■□□□□ 0.98
Atg9aQ68FE2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.17■□□□□ 0.98
Atg9aQ68FE2 Il3ra-202ENSMUST00000223589 738 ntBASIC21.17■□□□□ 0.98
Atg9aQ68FE2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Atg9aQ68FE2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atg9aQ68FE2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Atg9aQ68FE2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21.17■□□□□ 0.98
Atg9aQ68FE2 Gm19721-201ENSMUST00000195284 1764 ntBASIC21.17■□□□□ 0.98
Atg9aQ68FE2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Atg9aQ68FE2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atg9aQ68FE2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Atg9aQ68FE2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atg9aQ68FE2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Atg9aQ68FE2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atg9aQ68FE2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atg9aQ68FE2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Atg9aQ68FE2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atg9aQ68FE2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atg9aQ68FE2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Atg9aQ68FE2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Atg9aQ68FE2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atg9aQ68FE2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Atg9aQ68FE2 Gm45058-201ENSMUST00000205810 766 ntBASIC21.16■□□□□ 0.98
Atg9aQ68FE2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.16■□□□□ 0.98
Atg9aQ68FE2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Atg9aQ68FE2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atg9aQ68FE2 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.16■□□□□ 0.98
Atg9aQ68FE2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atg9aQ68FE2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms