Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
Col11a2Q64739 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC21.41■■□□□ 1.02
Col11a2Q64739 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col11a2Q64739 Gm27525-201ENSMUST00000184465 107 ntBASIC21.41■■□□□ 1.02
Col11a2Q64739 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col11a2Q64739 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col11a2Q64739 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col11a2Q64739 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col11a2Q64739 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.4■■□□□ 1.02
Col11a2Q64739 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col11a2Q64739 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col11a2Q64739 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Col11a2Q64739 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Col11a2Q64739 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC21.4■■□□□ 1.02
Col11a2Q64739 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC21.4■■□□□ 1.02
Col11a2Q64739 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col11a2Q64739 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Col11a2Q64739 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.39■■□□□ 1.02
Col11a2Q64739 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Col11a2Q64739 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col11a2Q64739 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Col11a2Q64739 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Col11a2Q64739 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col11a2Q64739 Zkscan4-202ENSMUST00000225845 1506 ntBASIC21.39■■□□□ 1.01
Col11a2Q64739 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col11a2Q64739 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Col11a2Q64739 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col11a2Q64739 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col11a2Q64739 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col11a2Q64739 Gm12895-201ENSMUST00000122214 226 ntBASIC21.38■■□□□ 1.01
Col11a2Q64739 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Col11a2Q64739 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col11a2Q64739 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC21.38■■□□□ 1.01
Col11a2Q64739 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col11a2Q64739 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Col11a2Q64739 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col11a2Q64739 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.38■■□□□ 1.01
Col11a2Q64739 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col11a2Q64739 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col11a2Q64739 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col11a2Q64739 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col11a2Q64739 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col11a2Q64739 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col11a2Q64739 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col11a2Q64739 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col11a2Q64739 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Col11a2Q64739 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col11a2Q64739 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col11a2Q64739 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col11a2Q64739 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col11a2Q64739 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC21.37■■□□□ 1.01
Col11a2Q64739 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC21.37■■□□□ 1.01
Col11a2Q64739 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col11a2Q64739 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col11a2Q64739 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col11a2Q64739 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.36■■□□□ 1.01
Col11a2Q64739 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col11a2Q64739 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col11a2Q64739 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC21.36■■□□□ 1.01
Col11a2Q64739 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC21.36■■□□□ 1.01
Col11a2Q64739 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Col11a2Q64739 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC21.36■■□□□ 1.01
Col11a2Q64739 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.36■■□□□ 1.01
Col11a2Q64739 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col11a2Q64739 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col11a2Q64739 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Col11a2Q64739 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC21.35■■□□□ 1.01
Col11a2Q64739 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Col11a2Q64739 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC21.35■■□□□ 1.01
Col11a2Q64739 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Col11a2Q64739 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Col11a2Q64739 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col11a2Q64739 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col11a2Q64739 Notumos-201ENSMUST00000151998 2659 ntBASIC21.35■■□□□ 1.01
Col11a2Q64739 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Col11a2Q64739 Mir8112-201ENSMUST00000184382 131 ntBASIC21.35■■□□□ 1.01
Col11a2Q64739 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.35■■□□□ 1.01
Col11a2Q64739 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.35■■□□□ 1.01
Col11a2Q64739 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col11a2Q64739 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col11a2Q64739 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Col11a2Q64739 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Col11a2Q64739 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Col11a2Q64739 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC21.34■■□□□ 1.01
Col11a2Q64739 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Col11a2Q64739 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Col11a2Q64739 AC122351.1-201ENSMUST00000220467 126 ntBASIC21.34■■□□□ 1.01
Col11a2Q64739 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Col11a2Q64739 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col11a2Q64739 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col11a2Q64739 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col11a2Q64739 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
Col11a2Q64739 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Col11a2Q64739 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC21.33■■□□□ 1.01
Col11a2Q64739 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Col11a2Q64739 Gm11452-201ENSMUST00000122376 690 ntBASIC21.33■■□□□ 1.01
Col11a2Q64739 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col11a2Q64739 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.33■■□□□ 1.01
Col11a2Q64739 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col11a2Q64739 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms