Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf4Q64287 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Irf4Q64287 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Irf4Q64287 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Irf4Q64287 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Irf4Q64287 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.27■□□□□ 0.36
Irf4Q64287 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Irf4Q64287 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Irf4Q64287 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Irf4Q64287 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.27■□□□□ 0.36
Irf4Q64287 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Irf4Q64287 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Irf4Q64287 Gm38027-201ENSMUST00000192315 235 ntBASIC17.27■□□□□ 0.36
Irf4Q64287 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.27■□□□□ 0.36
Irf4Q64287 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Irf4Q64287 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Irf4Q64287 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Irf4Q64287 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Irf4Q64287 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Irf4Q64287 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Irf4Q64287 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Irf4Q64287 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.27■□□□□ 0.35
Irf4Q64287 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Irf4Q64287 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Irf4Q64287 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Irf4Q64287 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Irf4Q64287 Gm6433-201ENSMUST00000118634 875 ntBASIC17.26■□□□□ 0.35
Irf4Q64287 Gm13559-201ENSMUST00000120476 863 ntBASIC17.26■□□□□ 0.35
Irf4Q64287 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Irf4Q64287 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Irf4Q64287 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Irf4Q64287 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Irf4Q64287 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Irf4Q64287 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Irf4Q64287 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Irf4Q64287 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Irf4Q64287 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Irf4Q64287 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.24■□□□□ 0.35
Irf4Q64287 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Irf4Q64287 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Irf4Q64287 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Irf4Q64287 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Irf4Q64287 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Irf4Q64287 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Irf4Q64287 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Irf4Q64287 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.24■□□□□ 0.35
Irf4Q64287 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Irf4Q64287 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Irf4Q64287 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Irf4Q64287 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Irf4Q64287 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Irf4Q64287 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.24■□□□□ 0.35
Irf4Q64287 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Irf4Q64287 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Irf4Q64287 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Irf4Q64287 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Irf4Q64287 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Irf4Q64287 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Irf4Q64287 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Irf4Q64287 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.23■□□□□ 0.35
Irf4Q64287 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Irf4Q64287 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.23■□□□□ 0.35
Irf4Q64287 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Irf4Q64287 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Irf4Q64287 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Irf4Q64287 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Irf4Q64287 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Irf4Q64287 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Irf4Q64287 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Irf4Q64287 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Irf4Q64287 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Irf4Q64287 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Irf4Q64287 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Irf4Q64287 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.22■□□□□ 0.35
Irf4Q64287 Gm24841-201ENSMUST00000158676 357 ntBASIC17.22■□□□□ 0.35
Irf4Q64287 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Irf4Q64287 Gm7889-201ENSMUST00000185591 958 ntBASIC17.22■□□□□ 0.35
Irf4Q64287 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms