Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six2Q62232 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six2Q62232 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six2Q62232 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six2Q62232 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six2Q62232 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Six2Q62232 Gm29257-201ENSMUST00000186115 639 ntBASIC18.75■□□□□ 0.59
Six2Q62232 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six2Q62232 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six2Q62232 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Six2Q62232 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six2Q62232 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six2Q62232 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six2Q62232 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.75■□□□□ 0.59
Six2Q62232 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.75■□□□□ 0.59
Six2Q62232 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six2Q62232 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.75■□□□□ 0.59
Six2Q62232 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six2Q62232 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Six2Q62232 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six2Q62232 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six2Q62232 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six2Q62232 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six2Q62232 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Six2Q62232 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.74■□□□□ 0.59
Six2Q62232 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Six2Q62232 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Six2Q62232 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.74■□□□□ 0.59
Six2Q62232 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Six2Q62232 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six2Q62232 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six2Q62232 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six2Q62232 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Six2Q62232 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Six2Q62232 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Six2Q62232 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Six2Q62232 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Six2Q62232 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Six2Q62232 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six2Q62232 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six2Q62232 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six2Q62232 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six2Q62232 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six2Q62232 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six2Q62232 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Six2Q62232 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six2Q62232 Gm37292-201ENSMUST00000192062 758 ntBASIC18.73■□□□□ 0.59
Six2Q62232 Trmt13-210ENSMUST00000198454 880 ntBASIC18.73■□□□□ 0.59
Six2Q62232 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.73■□□□□ 0.59
Six2Q62232 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six2Q62232 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Six2Q62232 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.73■□□□□ 0.59
Six2Q62232 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Six2Q62232 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Six2Q62232 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Six2Q62232 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Six2Q62232 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Six2Q62232 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.72■□□□□ 0.59
Six2Q62232 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.72■□□□□ 0.59
Six2Q62232 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.72■□□□□ 0.59
Six2Q62232 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.72■□□□□ 0.59
Six2Q62232 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.72■□□□□ 0.59
Six2Q62232 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Six2Q62232 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Six2Q62232 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Six2Q62232 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six2Q62232 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.71■□□□□ 0.59
Six2Q62232 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six2Q62232 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six2Q62232 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Six2Q62232 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six2Q62232 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six2Q62232 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Six2Q62232 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Six2Q62232 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Six2Q62232 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.71■□□□□ 0.59
Six2Q62232 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six2Q62232 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six2Q62232 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six2Q62232 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Six2Q62232 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Six2Q62232 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six2Q62232 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six2Q62232 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Six2Q62232 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.7■□□□□ 0.58
Six2Q62232 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six2Q62232 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six2Q62232 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six2Q62232 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six2Q62232 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.7■□□□□ 0.58
Six2Q62232 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Six2Q62232 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six2Q62232 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six2Q62232 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Six2Q62232 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Six2Q62232 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Six2Q62232 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Six2Q62232 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six2Q62232 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six2Q62232 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms