Protein–RNA interactions for Protein: Q62193

Rpa2, Replication protein A 32 kDa subunit, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa2Q62193 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa2Q62193 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa2Q62193 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.15■□□□□ 0.18
Rpa2Q62193 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa2Q62193 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa2Q62193 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Rpa2Q62193 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa2Q62193 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa2Q62193 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa2Q62193 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa2Q62193 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rpa2Q62193 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa2Q62193 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rpa2Q62193 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rpa2Q62193 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa2Q62193 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa2Q62193 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.14■□□□□ 0.17
Rpa2Q62193 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.14■□□□□ 0.17
Rpa2Q62193 Gm42545-201ENSMUST00000202755 922 ntBASIC16.14■□□□□ 0.17
Rpa2Q62193 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.14■□□□□ 0.17
Rpa2Q62193 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa2Q62193 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa2Q62193 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.14■□□□□ 0.17
Rpa2Q62193 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa2Q62193 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa2Q62193 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa2Q62193 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rpa2Q62193 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.14■□□□□ 0.17
Rpa2Q62193 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa2Q62193 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa2Q62193 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa2Q62193 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa2Q62193 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa2Q62193 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa2Q62193 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa2Q62193 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.13■□□□□ 0.17
Rpa2Q62193 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rpa2Q62193 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.13■□□□□ 0.17
Rpa2Q62193 Mir2861-201ENSMUST00000175539 82 ntBASIC16.13■□□□□ 0.17
Rpa2Q62193 Gm8520-201ENSMUST00000186517 868 ntBASIC16.13■□□□□ 0.17
Rpa2Q62193 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.13■□□□□ 0.17
Rpa2Q62193 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa2Q62193 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa2Q62193 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.13■□□□□ 0.17
Rpa2Q62193 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa2Q62193 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa2Q62193 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Rpa2Q62193 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa2Q62193 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rpa2Q62193 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa2Q62193 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa2Q62193 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa2Q62193 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa2Q62193 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa2Q62193 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa2Q62193 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.12■□□□□ 0.17
Rpa2Q62193 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa2Q62193 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa2Q62193 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa2Q62193 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa2Q62193 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.12■□□□□ 0.17
Rpa2Q62193 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa2Q62193 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.12■□□□□ 0.17
Rpa2Q62193 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Rpa2Q62193 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa2Q62193 Gm22240-201ENSMUST00000175225 82 ntBASIC16.12■□□□□ 0.17
Rpa2Q62193 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa2Q62193 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.12■□□□□ 0.17
Rpa2Q62193 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.12■□□□□ 0.17
Rpa2Q62193 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa2Q62193 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa2Q62193 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa2Q62193 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.12■□□□□ 0.17
Rpa2Q62193 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa2Q62193 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa2Q62193 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa2Q62193 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.12■□□□□ 0.17
Rpa2Q62193 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa2Q62193 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rpa2Q62193 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.11■□□□□ 0.17
Rpa2Q62193 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa2Q62193 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa2Q62193 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa2Q62193 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa2Q62193 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa2Q62193 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa2Q62193 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.11■□□□□ 0.17
Rpa2Q62193 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa2Q62193 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.11■□□□□ 0.17
Rpa2Q62193 Gm10698-201ENSMUST00000182663 604 ntBASIC16.11■□□□□ 0.17
Rpa2Q62193 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.11■□□□□ 0.17
Rpa2Q62193 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.11■□□□□ 0.17
Rpa2Q62193 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.11■□□□□ 0.17
Rpa2Q62193 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rpa2Q62193 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa2Q62193 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa2Q62193 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa2Q62193 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa2Q62193 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rpa2Q62193 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms