Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.91□□□□□ -0.34
Foxc1Q61572 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.91□□□□□ -0.34
Foxc1Q61572 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Foxc1Q61572 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Foxc1Q61572 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Foxc1Q61572 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Foxc1Q61572 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Foxc1Q61572 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Foxc1Q61572 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Foxc1Q61572 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Foxc1Q61572 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Foxc1Q61572 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Foxc1Q61572 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.9□□□□□ -0.34
Foxc1Q61572 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Foxc1Q61572 Dio3-201ENSMUST00000097228 1449 ntBASIC12.9□□□□□ -0.34
Foxc1Q61572 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.9□□□□□ -0.34
Foxc1Q61572 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.9□□□□□ -0.34
Foxc1Q61572 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Foxc1Q61572 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Foxc1Q61572 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxc1Q61572 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Foxc1Q61572 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Foxc1Q61572 Gm43231-201ENSMUST00000202960 2258 ntBASIC12.9□□□□□ -0.35
Foxc1Q61572 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Foxc1Q61572 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxc1Q61572 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxc1Q61572 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxc1Q61572 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Foxc1Q61572 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Foxc1Q61572 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxc1Q61572 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxc1Q61572 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Foxc1Q61572 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxc1Q61572 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Foxc1Q61572 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.89□□□□□ -0.35
Foxc1Q61572 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Foxc1Q61572 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Foxc1Q61572 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.89□□□□□ -0.35
Foxc1Q61572 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.89□□□□□ -0.35
Foxc1Q61572 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxc1Q61572 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxc1Q61572 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxc1Q61572 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxc1Q61572 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Foxc1Q61572 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxc1Q61572 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Foxc1Q61572 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxc1Q61572 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxc1Q61572 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxc1Q61572 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Foxc1Q61572 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.88□□□□□ -0.35
Foxc1Q61572 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxc1Q61572 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxc1Q61572 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxc1Q61572 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.88□□□□□ -0.35
Foxc1Q61572 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.88□□□□□ -0.35
Foxc1Q61572 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxc1Q61572 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Foxc1Q61572 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxc1Q61572 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Foxc1Q61572 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxc1Q61572 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxc1Q61572 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxc1Q61572 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Foxc1Q61572 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.88□□□□□ -0.35
Foxc1Q61572 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxc1Q61572 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxc1Q61572 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxc1Q61572 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxc1Q61572 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxc1Q61572 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Foxc1Q61572 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Foxc1Q61572 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Foxc1Q61572 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Foxc1Q61572 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Foxc1Q61572 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.87□□□□□ -0.35
Foxc1Q61572 Gm32390-201ENSMUST00000212713 1172 ntBASIC12.87□□□□□ -0.35
Foxc1Q61572 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.87□□□□□ -0.35
Foxc1Q61572 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms