Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ift88Q61371 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ift88Q61371 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.5■□□□□ 0.71
Ift88Q61371 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ift88Q61371 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ift88Q61371 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ift88Q61371 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ift88Q61371 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ift88Q61371 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ift88Q61371 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ift88Q61371 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ift88Q61371 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ift88Q61371 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ift88Q61371 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ift88Q61371 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.49■□□□□ 0.71
Ift88Q61371 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ift88Q61371 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ift88Q61371 Gm38285-201ENSMUST00000192928 922 ntBASIC19.49■□□□□ 0.71
Ift88Q61371 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ift88Q61371 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ift88Q61371 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ift88Q61371 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ift88Q61371 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ift88Q61371 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ift88Q61371 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Ift88Q61371 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ift88Q61371 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ift88Q61371 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.48■□□□□ 0.71
Ift88Q61371 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
Ift88Q61371 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.48■□□□□ 0.71
Ift88Q61371 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ift88Q61371 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ift88Q61371 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ift88Q61371 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ift88Q61371 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ift88Q61371 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ift88Q61371 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ift88Q61371 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ift88Q61371 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.48■□□□□ 0.71
Ift88Q61371 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ift88Q61371 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ift88Q61371 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ift88Q61371 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ift88Q61371 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ift88Q61371 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ift88Q61371 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ift88Q61371 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ift88Q61371 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.47■□□□□ 0.71
Ift88Q61371 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ift88Q61371 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ift88Q61371 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ift88Q61371 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Ift88Q61371 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ift88Q61371 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.47■□□□□ 0.71
Ift88Q61371 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ift88Q61371 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ift88Q61371 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ift88Q61371 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ift88Q61371 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ift88Q61371 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.46■□□□□ 0.71
Ift88Q61371 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ift88Q61371 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ift88Q61371 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ift88Q61371 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.46■□□□□ 0.71
Ift88Q61371 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ift88Q61371 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ift88Q61371 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Ift88Q61371 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ift88Q61371 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ift88Q61371 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ift88Q61371 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ift88Q61371 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ift88Q61371 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ift88Q61371 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ift88Q61371 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ift88Q61371 Gm2399-201ENSMUST00000104944 225 ntBASIC19.45■□□□□ 0.7
Ift88Q61371 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ift88Q61371 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Ift88Q61371 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ift88Q61371 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.45■□□□□ 0.7
Ift88Q61371 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ift88Q61371 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ift88Q61371 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ift88Q61371 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ift88Q61371 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ift88Q61371 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ift88Q61371 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ift88Q61371 Gm29791-202ENSMUST00000207888 369 ntBASIC19.44■□□□□ 0.7
Ift88Q61371 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ift88Q61371 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ift88Q61371 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.44■□□□□ 0.7
Ift88Q61371 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
Ift88Q61371 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ift88Q61371 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ift88Q61371 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ift88Q61371 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.44■□□□□ 0.7
Ift88Q61371 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ift88Q61371 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ift88Q61371 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ift88Q61371 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms