Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Gm17808-201ENSMUST00000200859 894 ntBASIC19.35■□□□□ 0.69
Cln3Q61124 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.35■□□□□ 0.69
Cln3Q61124 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cln3Q61124 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cln3Q61124 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cln3Q61124 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cln3Q61124 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cln3Q61124 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cln3Q61124 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cln3Q61124 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cln3Q61124 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cln3Q61124 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.34■□□□□ 0.69
Cln3Q61124 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cln3Q61124 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cln3Q61124 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cln3Q61124 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cln3Q61124 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cln3Q61124 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cln3Q61124 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cln3Q61124 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.33■□□□□ 0.68
Cln3Q61124 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cln3Q61124 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cln3Q61124 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cln3Q61124 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.33■□□□□ 0.68
Cln3Q61124 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Cln3Q61124 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cln3Q61124 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Cln3Q61124 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cln3Q61124 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Cln3Q61124 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cln3Q61124 Gm28033-201ENSMUST00000184224 96 ntBASIC19.32■□□□□ 0.68
Cln3Q61124 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cln3Q61124 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cln3Q61124 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cln3Q61124 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cln3Q61124 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cln3Q61124 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cln3Q61124 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cln3Q61124 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cln3Q61124 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cln3Q61124 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cln3Q61124 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cln3Q61124 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cln3Q61124 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cln3Q61124 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.31■□□□□ 0.68
Cln3Q61124 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.31■□□□□ 0.68
Cln3Q61124 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cln3Q61124 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cln3Q61124 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cln3Q61124 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cln3Q61124 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cln3Q61124 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cln3Q61124 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cln3Q61124 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cln3Q61124 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.3■□□□□ 0.68
Cln3Q61124 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cln3Q61124 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cln3Q61124 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cln3Q61124 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cln3Q61124 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cln3Q61124 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cln3Q61124 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cln3Q61124 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cln3Q61124 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cln3Q61124 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cln3Q61124 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cln3Q61124 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cln3Q61124 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cln3Q61124 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cln3Q61124 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cln3Q61124 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cln3Q61124 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cln3Q61124 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cln3Q61124 Gm11355-201ENSMUST00000121120 306 ntBASIC19.29■□□□□ 0.68
Cln3Q61124 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cln3Q61124 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.29■□□□□ 0.68
Cln3Q61124 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cln3Q61124 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cln3Q61124 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cln3Q61124 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cln3Q61124 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
Cln3Q61124 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cln3Q61124 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cln3Q61124 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cln3Q61124 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.28■□□□□ 0.68
Cln3Q61124 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cln3Q61124 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cln3Q61124 Gm26039-201ENSMUST00000158152 144 ntBASIC19.28■□□□□ 0.68
Cln3Q61124 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.28■□□□□ 0.68
Cln3Q61124 Gm17807-201ENSMUST00000186869 298 ntBASIC19.28■□□□□ 0.68
Cln3Q61124 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cln3Q61124 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.28■□□□□ 0.68
Cln3Q61124 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cln3Q61124 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cln3Q61124 Idnk-204ENSMUST00000226010 1898 ntBASIC19.28■□□□□ 0.68
Cln3Q61124 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cln3Q61124 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cln3Q61124 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cln3Q61124 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.27■□□□□ 0.68
Cln3Q61124 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms