Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sim2Q61079 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sim2Q61079 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sim2Q61079 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sim2Q61079 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sim2Q61079 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.14■□□□□ 0.33
Sim2Q61079 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sim2Q61079 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.14■□□□□ 0.33
Sim2Q61079 Gm6623-201ENSMUST00000173570 544 ntBASIC17.14■□□□□ 0.33
Sim2Q61079 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sim2Q61079 Gm27742-201ENSMUST00000184667 60 ntBASIC17.14■□□□□ 0.33
Sim2Q61079 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Sim2Q61079 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.14■□□□□ 0.33
Sim2Q61079 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.14■□□□□ 0.33
Sim2Q61079 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sim2Q61079 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sim2Q61079 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sim2Q61079 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sim2Q61079 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sim2Q61079 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sim2Q61079 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.13■□□□□ 0.33
Sim2Q61079 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.13■□□□□ 0.33
Sim2Q61079 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.13■□□□□ 0.33
Sim2Q61079 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.13■□□□□ 0.33
Sim2Q61079 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sim2Q61079 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.13■□□□□ 0.33
Sim2Q61079 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sim2Q61079 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sim2Q61079 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.13■□□□□ 0.33
Sim2Q61079 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sim2Q61079 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sim2Q61079 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sim2Q61079 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sim2Q61079 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sim2Q61079 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sim2Q61079 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sim2Q61079 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sim2Q61079 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sim2Q61079 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sim2Q61079 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sim2Q61079 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sim2Q61079 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sim2Q61079 Gm26039-201ENSMUST00000158152 144 ntBASIC17.12■□□□□ 0.33
Sim2Q61079 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Sim2Q61079 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Sim2Q61079 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Sim2Q61079 Gm28659-201ENSMUST00000188013 759 ntBASIC17.12■□□□□ 0.33
Sim2Q61079 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sim2Q61079 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sim2Q61079 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sim2Q61079 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sim2Q61079 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sim2Q61079 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.12■□□□□ 0.33
Sim2Q61079 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sim2Q61079 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sim2Q61079 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.12■□□□□ 0.33
Sim2Q61079 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sim2Q61079 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sim2Q61079 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sim2Q61079 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sim2Q61079 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sim2Q61079 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.11■□□□□ 0.33
Sim2Q61079 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sim2Q61079 Gm10418-201ENSMUST00000100943 576 ntBASIC17.11■□□□□ 0.33
Sim2Q61079 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.11■□□□□ 0.33
Sim2Q61079 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.11■□□□□ 0.33
Sim2Q61079 Gm9731-201ENSMUST00000209480 747 ntBASIC17.11■□□□□ 0.33
Sim2Q61079 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sim2Q61079 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sim2Q61079 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sim2Q61079 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sim2Q61079 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sim2Q61079 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sim2Q61079 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Sim2Q61079 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sim2Q61079 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sim2Q61079 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sim2Q61079 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sim2Q61079 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Sim2Q61079 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sim2Q61079 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sim2Q61079 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.1■□□□□ 0.33
Sim2Q61079 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sim2Q61079 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.1■□□□□ 0.33
Sim2Q61079 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sim2Q61079 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.1■□□□□ 0.33
Sim2Q61079 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sim2Q61079 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sim2Q61079 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sim2Q61079 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sim2Q61079 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sim2Q61079 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.1■□□□□ 0.33
Sim2Q61079 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sim2Q61079 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.09■□□□□ 0.33
Sim2Q61079 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sim2Q61079 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sim2Q61079 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sim2Q61079 Il3ra-202ENSMUST00000223589 738 ntBASIC17.09■□□□□ 0.33
Sim2Q61079 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sim2Q61079 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms