Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scarb1Q61009 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scarb1Q61009 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scarb1Q61009 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scarb1Q61009 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scarb1Q61009 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scarb1Q61009 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scarb1Q61009 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Scarb1Q61009 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scarb1Q61009 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scarb1Q61009 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.85□□□□□ -0.03
Scarb1Q61009 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Scarb1Q61009 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Scarb1Q61009 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scarb1Q61009 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scarb1Q61009 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scarb1Q61009 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Scarb1Q61009 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.85□□□□□ -0.03
Scarb1Q61009 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.85□□□□□ -0.03
Scarb1Q61009 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scarb1Q61009 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Scarb1Q61009 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scarb1Q61009 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scarb1Q61009 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scarb1Q61009 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scarb1Q61009 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scarb1Q61009 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scarb1Q61009 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scarb1Q61009 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scarb1Q61009 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scarb1Q61009 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scarb1Q61009 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scarb1Q61009 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scarb1Q61009 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.84□□□□□ -0.03
Scarb1Q61009 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Scarb1Q61009 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scarb1Q61009 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scarb1Q61009 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Scarb1Q61009 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scarb1Q61009 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scarb1Q61009 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scarb1Q61009 Dancr-204ENSMUST00000132389 2347 ntBASIC14.83□□□□□ -0.03
Scarb1Q61009 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scarb1Q61009 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scarb1Q61009 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scarb1Q61009 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scarb1Q61009 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scarb1Q61009 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Scarb1Q61009 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Scarb1Q61009 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scarb1Q61009 Gm27454-201ENSMUST00000185090 204 ntBASIC14.83□□□□□ -0.04
Scarb1Q61009 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.83□□□□□ -0.04
Scarb1Q61009 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scarb1Q61009 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scarb1Q61009 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.83□□□□□ -0.04
Scarb1Q61009 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scarb1Q61009 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scarb1Q61009 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.83□□□□□ -0.04
Scarb1Q61009 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scarb1Q61009 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Scarb1Q61009 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scarb1Q61009 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scarb1Q61009 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scarb1Q61009 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scarb1Q61009 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scarb1Q61009 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scarb1Q61009 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scarb1Q61009 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scarb1Q61009 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scarb1Q61009 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.82□□□□□ -0.04
Scarb1Q61009 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Scarb1Q61009 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.82□□□□□ -0.04
Scarb1Q61009 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scarb1Q61009 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scarb1Q61009 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scarb1Q61009 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scarb1Q61009 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scarb1Q61009 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scarb1Q61009 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scarb1Q61009 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.82□□□□□ -0.04
Scarb1Q61009 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Scarb1Q61009 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scarb1Q61009 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.81□□□□□ -0.04
Scarb1Q61009 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Scarb1Q61009 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scarb1Q61009 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.81□□□□□ -0.04
Scarb1Q61009 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scarb1Q61009 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scarb1Q61009 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scarb1Q61009 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scarb1Q61009 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.81□□□□□ -0.04
Scarb1Q61009 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scarb1Q61009 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Scarb1Q61009 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scarb1Q61009 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scarb1Q61009 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scarb1Q61009 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scarb1Q61009 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scarb1Q61009 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Scarb1Q61009 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms