Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ubr3Q5U430 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ubr3Q5U430 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr3Q5U430 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr3Q5U430 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr3Q5U430 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr3Q5U430 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr3Q5U430 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr3Q5U430 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr3Q5U430 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC21.44■■□□□ 1.02
Ubr3Q5U430 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr3Q5U430 Mir8112-201ENSMUST00000184382 131 ntBASIC21.44■■□□□ 1.02
Ubr3Q5U430 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr3Q5U430 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC21.44■■□□□ 1.02
Ubr3Q5U430 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.44■■□□□ 1.02
Ubr3Q5U430 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr3Q5U430 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr3Q5U430 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr3Q5U430 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.44■■□□□ 1.02
Ubr3Q5U430 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.43■■□□□ 1.02
Ubr3Q5U430 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Ubr3Q5U430 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Ubr3Q5U430 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr3Q5U430 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr3Q5U430 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ubr3Q5U430 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr3Q5U430 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr3Q5U430 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr3Q5U430 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr3Q5U430 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.43■■□□□ 1.02
Ubr3Q5U430 Zkscan4-202ENSMUST00000225845 1506 ntBASIC21.43■■□□□ 1.02
Ubr3Q5U430 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr3Q5U430 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC21.43■■□□□ 1.02
Ubr3Q5U430 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr3Q5U430 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC21.43■■□□□ 1.02
Ubr3Q5U430 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.42■■□□□ 1.02
Ubr3Q5U430 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ubr3Q5U430 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ubr3Q5U430 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC21.42■■□□□ 1.02
Ubr3Q5U430 Gm12895-201ENSMUST00000122214 226 ntBASIC21.42■■□□□ 1.02
Ubr3Q5U430 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ubr3Q5U430 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ubr3Q5U430 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ubr3Q5U430 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ubr3Q5U430 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubr3Q5U430 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.41■■□□□ 1.02
Ubr3Q5U430 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ubr3Q5U430 AC122351.1-201ENSMUST00000220467 126 ntBASIC21.41■■□□□ 1.02
Ubr3Q5U430 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Ubr3Q5U430 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Ubr3Q5U430 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubr3Q5U430 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubr3Q5U430 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Ubr3Q5U430 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ubr3Q5U430 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ubr3Q5U430 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Ubr3Q5U430 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC21.41■■□□□ 1.02
Ubr3Q5U430 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubr3Q5U430 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubr3Q5U430 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubr3Q5U430 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubr3Q5U430 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubr3Q5U430 Notumos-201ENSMUST00000151998 2659 ntBASIC21.4■■□□□ 1.02
Ubr3Q5U430 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubr3Q5U430 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Ubr3Q5U430 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Ubr3Q5U430 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.4■■□□□ 1.02
Ubr3Q5U430 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ubr3Q5U430 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ubr3Q5U430 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ubr3Q5U430 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ubr3Q5U430 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ubr3Q5U430 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ubr3Q5U430 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ubr3Q5U430 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.39■■□□□ 1.01
Ubr3Q5U430 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ubr3Q5U430 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ubr3Q5U430 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Ubr3Q5U430 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Ubr3Q5U430 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubr3Q5U430 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubr3Q5U430 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ubr3Q5U430 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ubr3Q5U430 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
Ubr3Q5U430 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC21.38■■□□□ 1.01
Ubr3Q5U430 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubr3Q5U430 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubr3Q5U430 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ubr3Q5U430 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubr3Q5U430 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubr3Q5U430 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubr3Q5U430 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC21.37■■□□□ 1.01
Ubr3Q5U430 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubr3Q5U430 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubr3Q5U430 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubr3Q5U430 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubr3Q5U430 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ubr3Q5U430 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubr3Q5U430 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubr3Q5U430 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms