Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shroom1Q5SX79 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shroom1Q5SX79 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shroom1Q5SX79 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shroom1Q5SX79 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Shroom1Q5SX79 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Shroom1Q5SX79 Gm7889-201ENSMUST00000185591 958 ntBASIC18.7■□□□□ 0.58
Shroom1Q5SX79 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shroom1Q5SX79 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shroom1Q5SX79 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shroom1Q5SX79 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.69■□□□□ 0.58
Shroom1Q5SX79 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Shroom1Q5SX79 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shroom1Q5SX79 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shroom1Q5SX79 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shroom1Q5SX79 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shroom1Q5SX79 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Shroom1Q5SX79 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Shroom1Q5SX79 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Shroom1Q5SX79 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom1Q5SX79 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom1Q5SX79 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom1Q5SX79 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Shroom1Q5SX79 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Shroom1Q5SX79 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.68■□□□□ 0.58
Shroom1Q5SX79 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom1Q5SX79 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom1Q5SX79 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom1Q5SX79 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.68■□□□□ 0.58
Shroom1Q5SX79 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom1Q5SX79 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.68■□□□□ 0.58
Shroom1Q5SX79 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom1Q5SX79 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom1Q5SX79 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom1Q5SX79 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom1Q5SX79 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom1Q5SX79 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom1Q5SX79 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom1Q5SX79 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom1Q5SX79 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.67■□□□□ 0.58
Shroom1Q5SX79 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Shroom1Q5SX79 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom1Q5SX79 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom1Q5SX79 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Shroom1Q5SX79 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Shroom1Q5SX79 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.67■□□□□ 0.58
Shroom1Q5SX79 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom1Q5SX79 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom1Q5SX79 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom1Q5SX79 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom1Q5SX79 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Shroom1Q5SX79 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom1Q5SX79 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom1Q5SX79 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.67■□□□□ 0.58
Shroom1Q5SX79 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.67■□□□□ 0.58
Shroom1Q5SX79 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom1Q5SX79 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom1Q5SX79 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.67■□□□□ 0.58
Shroom1Q5SX79 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Shroom1Q5SX79 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shroom1Q5SX79 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shroom1Q5SX79 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Shroom1Q5SX79 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shroom1Q5SX79 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Shroom1Q5SX79 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shroom1Q5SX79 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shroom1Q5SX79 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.66■□□□□ 0.58
Shroom1Q5SX79 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shroom1Q5SX79 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shroom1Q5SX79 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Shroom1Q5SX79 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.66■□□□□ 0.58
Shroom1Q5SX79 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shroom1Q5SX79 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Shroom1Q5SX79 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shroom1Q5SX79 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shroom1Q5SX79 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shroom1Q5SX79 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.65■□□□□ 0.58
Shroom1Q5SX79 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Shroom1Q5SX79 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shroom1Q5SX79 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shroom1Q5SX79 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shroom1Q5SX79 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shroom1Q5SX79 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.65■□□□□ 0.58
Shroom1Q5SX79 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.65■□□□□ 0.58
Shroom1Q5SX79 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shroom1Q5SX79 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Shroom1Q5SX79 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shroom1Q5SX79 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shroom1Q5SX79 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shroom1Q5SX79 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shroom1Q5SX79 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shroom1Q5SX79 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.65■□□□□ 0.58
Shroom1Q5SX79 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shroom1Q5SX79 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shroom1Q5SX79 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shroom1Q5SX79 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.65■□□□□ 0.58
Shroom1Q5SX79 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shroom1Q5SX79 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Shroom1Q5SX79 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Shroom1Q5SX79 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms