Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vps54Q5SPW0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps54Q5SPW0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps54Q5SPW0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps54Q5SPW0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps54Q5SPW0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps54Q5SPW0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps54Q5SPW0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps54Q5SPW0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Vps54Q5SPW0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Vps54Q5SPW0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps54Q5SPW0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Vps54Q5SPW0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps54Q5SPW0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps54Q5SPW0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.12■□□□□ 0.97
Vps54Q5SPW0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps54Q5SPW0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps54Q5SPW0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Vps54Q5SPW0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Vps54Q5SPW0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps54Q5SPW0 Gm37194-201ENSMUST00000193092 3031 ntBASIC21.12■□□□□ 0.97
Vps54Q5SPW0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.12■□□□□ 0.97
Vps54Q5SPW0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps54Q5SPW0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps54Q5SPW0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps54Q5SPW0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps54Q5SPW0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vps54Q5SPW0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Vps54Q5SPW0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.11■□□□□ 0.97
Vps54Q5SPW0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.11■□□□□ 0.97
Vps54Q5SPW0 Odf3b-204ENSMUST00000227834 930 ntBASIC21.11■□□□□ 0.97
Vps54Q5SPW0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps54Q5SPW0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.11■□□□□ 0.97
Vps54Q5SPW0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps54Q5SPW0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps54Q5SPW0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps54Q5SPW0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.1■□□□□ 0.97
Vps54Q5SPW0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Vps54Q5SPW0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Vps54Q5SPW0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Vps54Q5SPW0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Vps54Q5SPW0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.1■□□□□ 0.97
Vps54Q5SPW0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps54Q5SPW0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps54Q5SPW0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Vps54Q5SPW0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps54Q5SPW0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps54Q5SPW0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps54Q5SPW0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps54Q5SPW0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.1■□□□□ 0.97
Vps54Q5SPW0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps54Q5SPW0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps54Q5SPW0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Vps54Q5SPW0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Vps54Q5SPW0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Vps54Q5SPW0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps54Q5SPW0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.09■□□□□ 0.97
Vps54Q5SPW0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
Vps54Q5SPW0 Mir8112-201ENSMUST00000184382 131 ntBASIC21.09■□□□□ 0.97
Vps54Q5SPW0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps54Q5SPW0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps54Q5SPW0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps54Q5SPW0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Vps54Q5SPW0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Vps54Q5SPW0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps54Q5SPW0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.08■□□□□ 0.97
Vps54Q5SPW0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Vps54Q5SPW0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps54Q5SPW0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Vps54Q5SPW0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Vps54Q5SPW0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Vps54Q5SPW0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.08■□□□□ 0.97
Vps54Q5SPW0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps54Q5SPW0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps54Q5SPW0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.08■□□□□ 0.97
Vps54Q5SPW0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.08■□□□□ 0.97
Vps54Q5SPW0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps54Q5SPW0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Vps54Q5SPW0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Vps54Q5SPW0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps54Q5SPW0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Vps54Q5SPW0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Vps54Q5SPW0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Vps54Q5SPW0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.07■□□□□ 0.96
Vps54Q5SPW0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps54Q5SPW0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps54Q5SPW0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Vps54Q5SPW0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.07■□□□□ 0.96
Vps54Q5SPW0 Gm24841-201ENSMUST00000158676 357 ntBASIC21.07■□□□□ 0.96
Vps54Q5SPW0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Vps54Q5SPW0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC21.07■□□□□ 0.96
Vps54Q5SPW0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.07■□□□□ 0.96
Vps54Q5SPW0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Vps54Q5SPW0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps54Q5SPW0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps54Q5SPW0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Vps54Q5SPW0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
Vps54Q5SPW0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Vps54Q5SPW0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps54Q5SPW0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms