Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav2Q5R1I9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav2Q5R1I9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Trav2Q5R1I9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav2Q5R1I9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav2Q5R1I9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Trav2Q5R1I9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav2Q5R1I9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav2Q5R1I9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav2Q5R1I9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav2Q5R1I9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav2Q5R1I9 Gm13836-201ENSMUST00000121159 501 ntBASIC14.02□□□□□ -0.17
Trav2Q5R1I9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav2Q5R1I9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav2Q5R1I9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav2Q5R1I9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav2Q5R1I9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav2Q5R1I9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav2Q5R1I9 Gm30025-201ENSMUST00000218555 728 ntBASIC14.02□□□□□ -0.17
Trav2Q5R1I9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav2Q5R1I9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav2Q5R1I9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav2Q5R1I9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav2Q5R1I9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav2Q5R1I9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 Gm10517-202ENSMUST00000192970 758 ntBASIC14.01□□□□□ -0.17
Trav2Q5R1I9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.01□□□□□ -0.17
Trav2Q5R1I9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav2Q5R1I9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav2Q5R1I9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav2Q5R1I9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
Trav2Q5R1I9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav2Q5R1I9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav2Q5R1I9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav2Q5R1I9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav2Q5R1I9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav2Q5R1I9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav2Q5R1I9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14□□□□□ -0.17
Trav2Q5R1I9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav2Q5R1I9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trav2Q5R1I9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav2Q5R1I9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav2Q5R1I9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav2Q5R1I9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14□□□□□ -0.17
Trav2Q5R1I9 Gm9694-201ENSMUST00000193347 1189 ntBASIC14□□□□□ -0.17
Trav2Q5R1I9 Gm29791-202ENSMUST00000207888 369 ntBASIC14□□□□□ -0.17
Trav2Q5R1I9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav2Q5R1I9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav2Q5R1I9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav2Q5R1I9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav2Q5R1I9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Trav2Q5R1I9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav2Q5R1I9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav2Q5R1I9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Gm3375-201ENSMUST00000203929 796 ntBASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Gm4974-201ENSMUST00000209974 875 ntBASIC13.99□□□□□ -0.17
Trav2Q5R1I9 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trav2Q5R1I9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms