Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trav7d-3Q5R1I1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-3Q5R1I1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav7d-3Q5R1I1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-3Q5R1I1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Gm7290-201ENSMUST00000104990 617 ntBASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Gm12918-201ENSMUST00000120234 636 ntBASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Gm15710-201ENSMUST00000121821 636 ntBASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Gm5075-201ENSMUST00000196916 622 ntBASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-3Q5R1I1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-3Q5R1I1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-3Q5R1I1 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.92□□□□□ -0.34
Trav7d-3Q5R1I1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav7d-3Q5R1I1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-3Q5R1I1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav7d-3Q5R1I1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Trav7d-3Q5R1I1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-3Q5R1I1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav7d-3Q5R1I1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-3Q5R1I1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-3Q5R1I1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-3Q5R1I1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-3Q5R1I1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-3Q5R1I1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Gm6365-201ENSMUST00000054711 744 ntBASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-3Q5R1I1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trav7d-3Q5R1I1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-3Q5R1I1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-3Q5R1I1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-3Q5R1I1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-3Q5R1I1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms