Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Gm2559-201ENSMUST00000201323 363 ntBASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav5d-4Q5R1F6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 Mtag2-201ENSMUST00000058665 714 ntBASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5d-4Q5R1F6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Gm4968-201ENSMUST00000071458 858 ntBASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5d-4Q5R1F6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5d-4Q5R1F6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5d-4Q5R1F6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav5d-4Q5R1F6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav5d-4Q5R1F6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5d-4Q5R1F6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5d-4Q5R1F6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5d-4Q5R1F6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav5d-4Q5R1F6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav5d-4Q5R1F6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5d-4Q5R1F6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5d-4Q5R1F6 Gm12896-201ENSMUST00000118430 226 ntBASIC15.1■□□□□ 0.01
Trav5d-4Q5R1F6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.1■□□□□ 0.01
Trav5d-4Q5R1F6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5d-4Q5R1F6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav5d-4Q5R1F6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5d-4Q5R1F6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms