Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trav6-3Q5R1E6 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.14□□□□□ -0.15
Trav6-3Q5R1E6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-3Q5R1E6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-3Q5R1E6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-3Q5R1E6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav6-3Q5R1E6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-3Q5R1E6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-3Q5R1E6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-3Q5R1E6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-3Q5R1E6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav6-3Q5R1E6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Trav6-3Q5R1E6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav6-3Q5R1E6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 Gm26571-201ENSMUST00000181399 666 ntBASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 Gm26524-201ENSMUST00000192339 390 ntBASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-3Q5R1E6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 Gm42569-201ENSMUST00000200539 472 ntBASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-3Q5R1E6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Mir2861-201ENSMUST00000175539 82 ntBASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms