Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8d-2Q5R1B6 Gm28659-201ENSMUST00000188013 759 ntBASIC17.15■□□□□ 0.34
Trav8d-2Q5R1B6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8d-2Q5R1B6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trav8d-2Q5R1B6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.15■□□□□ 0.34
Trav8d-2Q5R1B6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8d-2Q5R1B6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8d-2Q5R1B6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Tgds-204ENSMUST00000228543 1594 ntBASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav8d-2Q5R1B6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-2Q5R1B6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-2Q5R1B6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Trav8d-2Q5R1B6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-2Q5R1B6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-2Q5R1B6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-2Q5R1B6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-2Q5R1B6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-2Q5R1B6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trav8d-2Q5R1B6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Trav8d-2Q5R1B6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav8d-2Q5R1B6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.13■□□□□ 0.33
Trav8d-2Q5R1B6 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.13■□□□□ 0.33
Trav8d-2Q5R1B6 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.13■□□□□ 0.33
Trav8d-2Q5R1B6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-2Q5R1B6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-2Q5R1B6 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.13■□□□□ 0.33
Trav8d-2Q5R1B6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-2Q5R1B6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav8d-2Q5R1B6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8d-2Q5R1B6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8d-2Q5R1B6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trav8d-2Q5R1B6 Actl10-202ENSMUST00000226583 1501 ntBASIC17.12■□□□□ 0.33
Trav8d-2Q5R1B6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8d-2Q5R1B6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Trav8d-2Q5R1B6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav8d-2Q5R1B6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav8d-2Q5R1B6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8d-2Q5R1B6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8d-2Q5R1B6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8d-2Q5R1B6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8d-2Q5R1B6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8d-2Q5R1B6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8d-2Q5R1B6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.12■□□□□ 0.33
Trav8d-2Q5R1B6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8d-2Q5R1B6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8d-2Q5R1B6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8d-2Q5R1B6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8d-2Q5R1B6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
Trav8d-2Q5R1B6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-2Q5R1B6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-2Q5R1B6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-2Q5R1B6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-2Q5R1B6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-2Q5R1B6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-2Q5R1B6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-2Q5R1B6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-2Q5R1B6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-2Q5R1B6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.11■□□□□ 0.33
Trav8d-2Q5R1B6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-2Q5R1B6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-2Q5R1B6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-2Q5R1B6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-2Q5R1B6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-2Q5R1B6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-2Q5R1B6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-2Q5R1B6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-2Q5R1B6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav8d-2Q5R1B6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8d-2Q5R1B6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8d-2Q5R1B6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8d-2Q5R1B6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8d-2Q5R1B6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8d-2Q5R1B6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trav8d-2Q5R1B6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8d-2Q5R1B6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8d-2Q5R1B6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8d-2Q5R1B6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8d-2Q5R1B6 Gm34391-201ENSMUST00000203706 907 ntBASIC17.1■□□□□ 0.33
Trav8d-2Q5R1B6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.1■□□□□ 0.33
Trav8d-2Q5R1B6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms