Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.07■□□□□ 0.32
Col27a1Q5QNQ9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col27a1Q5QNQ9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col27a1Q5QNQ9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col27a1Q5QNQ9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col27a1Q5QNQ9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col27a1Q5QNQ9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.06■□□□□ 0.32
Col27a1Q5QNQ9 Gm1401-201ENSMUST00000122048 772 ntBASIC17.06■□□□□ 0.32
Col27a1Q5QNQ9 Gm7063-201ENSMUST00000186840 981 ntBASIC17.06■□□□□ 0.32
Col27a1Q5QNQ9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.06■□□□□ 0.32
Col27a1Q5QNQ9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col27a1Q5QNQ9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col27a1Q5QNQ9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col27a1Q5QNQ9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col27a1Q5QNQ9 Gm11779-201ENSMUST00000118541 368 ntBASIC17.05■□□□□ 0.32
Col27a1Q5QNQ9 Mir5131-201ENSMUST00000175426 93 ntBASIC17.05■□□□□ 0.32
Col27a1Q5QNQ9 Gm27702-201ENSMUST00000184512 56 ntBASIC17.05■□□□□ 0.32
Col27a1Q5QNQ9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.05■□□□□ 0.32
Col27a1Q5QNQ9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.05■□□□□ 0.32
Col27a1Q5QNQ9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Col27a1Q5QNQ9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col27a1Q5QNQ9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Col27a1Q5QNQ9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col27a1Q5QNQ9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col27a1Q5QNQ9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.05■□□□□ 0.32
Col27a1Q5QNQ9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col27a1Q5QNQ9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col27a1Q5QNQ9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col27a1Q5QNQ9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col27a1Q5QNQ9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col27a1Q5QNQ9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Col27a1Q5QNQ9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col27a1Q5QNQ9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.04■□□□□ 0.32
Col27a1Q5QNQ9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col27a1Q5QNQ9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.04■□□□□ 0.32
Col27a1Q5QNQ9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col27a1Q5QNQ9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col27a1Q5QNQ9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col27a1Q5QNQ9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col27a1Q5QNQ9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col27a1Q5QNQ9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col27a1Q5QNQ9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col27a1Q5QNQ9 Gm4995-201ENSMUST00000117247 432 ntBASIC17.03■□□□□ 0.32
Col27a1Q5QNQ9 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.03■□□□□ 0.32
Col27a1Q5QNQ9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.03■□□□□ 0.32
Col27a1Q5QNQ9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col27a1Q5QNQ9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.03■□□□□ 0.32
Col27a1Q5QNQ9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col27a1Q5QNQ9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.03■□□□□ 0.32
Col27a1Q5QNQ9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.03■□□□□ 0.32
Col27a1Q5QNQ9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col27a1Q5QNQ9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.03■□□□□ 0.32
Col27a1Q5QNQ9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col27a1Q5QNQ9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col27a1Q5QNQ9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col27a1Q5QNQ9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.03■□□□□ 0.32
Col27a1Q5QNQ9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col27a1Q5QNQ9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col27a1Q5QNQ9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.03■□□□□ 0.32
Col27a1Q5QNQ9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.03■□□□□ 0.32
Col27a1Q5QNQ9 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.03■□□□□ 0.32
Col27a1Q5QNQ9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col27a1Q5QNQ9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col27a1Q5QNQ9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col27a1Q5QNQ9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col27a1Q5QNQ9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.02■□□□□ 0.31
Col27a1Q5QNQ9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.02■□□□□ 0.31
Col27a1Q5QNQ9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.02■□□□□ 0.31
Col27a1Q5QNQ9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.02■□□□□ 0.31
Col27a1Q5QNQ9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col27a1Q5QNQ9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Col27a1Q5QNQ9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.02■□□□□ 0.31
Col27a1Q5QNQ9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col27a1Q5QNQ9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Col27a1Q5QNQ9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col27a1Q5QNQ9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col27a1Q5QNQ9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col27a1Q5QNQ9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Col27a1Q5QNQ9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.01■□□□□ 0.31
Col27a1Q5QNQ9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Col27a1Q5QNQ9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col27a1Q5QNQ9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col27a1Q5QNQ9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col27a1Q5QNQ9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col27a1Q5QNQ9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col27a1Q5QNQ9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col27a1Q5QNQ9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col27a1Q5QNQ9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col27a1Q5QNQ9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col27a1Q5QNQ9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17■□□□□ 0.31
Col27a1Q5QNQ9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17■□□□□ 0.31
Col27a1Q5QNQ9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col27a1Q5QNQ9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Col27a1Q5QNQ9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col27a1Q5QNQ9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col27a1Q5QNQ9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col27a1Q5QNQ9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col27a1Q5QNQ9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17■□□□□ 0.31
Col27a1Q5QNQ9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17■□□□□ 0.31
Col27a1Q5QNQ9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms